RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 CENPHQ9H3R5 247 aa9.94□□□□□ -0.82
CLSTN3-209ENST00000539982 RLIMQ9NVW2 624 aa9.94□□□□□ -0.82
CLSTN3-209ENST00000539982 ASIC5Q9NY37 505 aa9.94□□□□□ -0.82
CLSTN3-209ENST00000539982 NOP53Q9NZM5 478 aaKnown RBP9.94□□□□□ -0.82
CLSTN3-209ENST00000539982 ZNF346Q9UL40 294 aaKnown RBP9.94□□□□□ -0.82
CLSTN3-209ENST00000539982 CORINQ9Y5Q5 1042 aa9.94□□□□□ -0.82
CLSTN3-209ENST00000539982 WNK2Q9Y3S1 2297 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 DSPPQ9NZW4 1301 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 CDHR4A6H8M9 788 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 HMGB1P1B2RPK0 211 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 FTCDNL1E5RQL4 147 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 RGS16O15492 202 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 CDC14BO60729 498 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 SEC14L2O76054 403 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 AHSA1O95433 338 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 FSHBP01225 129 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 CD79AP11912 226 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 CRYBB2P43320 205 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 MAGEB1P43366 347 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 GALK2Q01415 458 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 PIGFQ07326 219 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 C1DQ13901 141 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 OCLNQ16625 522 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 TUSC1Q2TAM9 212 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 SMU1Q2TAY7 513 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 GLIPR1L2Q4G1C9 344 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 AVPI1Q5T686 147 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 RNF130Q86XS8 419 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 TREML1Q86YW5 311 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 PEX5LQ8IYB4 626 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 SLC35A5Q9BS91 424 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 SLITRK2Q9H156 845 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 DENND2DQ9H6A0 471 aaPredicted RBP9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 MED29Q9NX70 200 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 B3GAT1Q9P2W7 334 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 OPN4Q9UHM6 478 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 LGALS13Q9UHV8 139 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 ZDHHC2Q9UIJ5 367 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 FZR1Q9UM11 496 aa9.93□□□□□ -0.82
CLSTN3-209ENST00000539982 LOC102725191A0A1B0GVB3 256 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 A0A1W2PPW3 197 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 C17orf100A8MU93 164 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 M0R3G1 203 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 IGHV2-5P01817 119 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 C1QCP02747 245 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 NR2F1P10589 423 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 GTF2E2P29084 291 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 RAD52P43351 418 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 RPS5P46782 204 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 ANXA11P50995 505 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 RAB1AP62820 205 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 IL13RA1P78552 427 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 CCL8P80075 99 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 TXNL4AP83876 142 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 TEKQ02763 1124 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 TTMPQ5BVD1 217 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 PHYHD1Q5SRE7 291 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 DOK3Q7L591 496 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 ZNF627Q7L945 461 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 C4orf33Q8N1A6 199 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 SIGLECL1Q8N7X8 197 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 SYT14Q8NB59 555 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 MGARPQ8TDB4 240 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 ATP6V1G3Q96LB4 118 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 OR2M2Q96R28 347 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 PTDSS2Q9BVG9 487 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 C1QTNF5Q9BXJ0 243 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 ZMAT3Q9HA38 289 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 HINT3Q9NQE9 182 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 ARMCX1Q9P291 453 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 GPR160Q9UJ42 338 aa9.92□□□□□ -0.82
CLSTN3-209ENST00000539982 NOTCH1P46531 2555 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 IGHV1-69-2A0A0G2JMI3 117 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 AKAP8O43823 692 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 NCF2P19878 526 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 ZFP36P26651 326 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 ARRB2P32121 409 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 SERPINB5P36952 375 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 PTDSS1P48651 473 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 SELENOVP59797 346 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 EGR4Q05215 589 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 NKPD1Q17RQ9 610 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 PCGF3Q3KNV8 242 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 ALKBH6Q3KRA9 238 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 TNFAIP8L3Q5GJ75 292 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 ATG16L1Q676U5 607 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 TMEM154Q6P9G4 183 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 ZNF813Q6ZN06 617 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 RETREG3Q86VR2 466 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 VRK2Q86Y07 508 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 C20orf196Q8IYI0 205 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 TMEM123Q8N131 208 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 OR52P1PQ8NH57 321 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 TESCQ96BS2 214 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 KTI12Q96EK9 354 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 DUX5Q96PT3 197 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 GPA33Q99795 319 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 MECRQ9BV79 373 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 NKIRAS2Q9NYR9 191 aa9.91□□□□□ -0.82
CLSTN3-209ENST00000539982 TAAR3PQ9P1P4 343 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms