RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 RPS23P62266 143 aaKnown RBP13.28□□□□□ -0.28
UBE3B-211ENST00000539843 GALK2Q01415 458 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 PUDPQ08623 228 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 SNTB2Q13425 540 aaKnown RBP13.28□□□□□ -0.28
UBE3B-211ENST00000539843 DAG1Q14118 895 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 SQLEQ14534 574 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 OR1Q1Q15612 314 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 CYP51A1Q16850 503 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 GSG1Q2KHT4 349 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 TRMT5Q32P41 509 aaKnown RBP13.28□□□□□ -0.28
UBE3B-211ENST00000539843 CARD17Q5XLA6 110 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 UGT2A3Q6UWM9 527 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 LINGO2Q7L985 606 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 LRR1Q96L50 414 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 OR2M2Q96R28 347 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 ULBP2Q9BZM5 246 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 DENND2DQ9H6A0 471 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-211ENST00000539843 B3GAT1Q9P2W7 334 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 CMAHPQ9Y471 501 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 COL6A5A8TX70 2615 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 IGHV2OR16-5A0A0B4J2B6 119 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 A0A0B4J2E0 115 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 A0A1B0GX12 115 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 VWC2LB2RUY7 222 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 FZD7O75084 574 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 MT-ATP6P00846 226 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 CD79AP11912 226 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 DAOP14920 347 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 ZNF23P17027 643 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 AHCYP23526 432 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 HTR2AP28223 471 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 AQP1P29972 269 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 CALCRP30988 508 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 THBS2P35442 1172 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 IDH3AP50213 366 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 CHN2P52757 468 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 AGKQ53H12 422 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 GKAP1Q5VSY0 366 aaPredicted RBP13.27□□□□□ -0.29
UBE3B-211ENST00000539843 REP15Q6BDI9 236 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 ZNF813Q6ZN06 617 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 MDP1Q86V88 176 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 SLC30A8Q8IWU4 369 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 SVOPLQ8N434 492 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 C11orf65Q8NCR3 313 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 CKAP2Q8WWK9 683 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 FOXN4Q96NZ1 517 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 TMEM43Q9BTV4 400 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 NELFAQ9H3P2 528 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 MRPL39Q9NYK5 338 aaKnown RBP13.27□□□□□ -0.29
UBE3B-211ENST00000539843 SLC25A37Q9NYZ2 338 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 VAPAQ9P0L0 249 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 SEC14L4Q9UDX3 406 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 LEF1Q9UJU2 399 aaPredicted RBP13.27□□□□□ -0.29
UBE3B-211ENST00000539843 TRIM33Q9UPN9 1127 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 ALPK2Q86TB3 2170 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 DNHD1Q96M86 4753 aa13.27□□□□□ -0.29
UBE3B-211ENST00000539843 ANGPT2O15123 496 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 TRAF3IP2O43734 574 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-211ENST00000539843 SERPINI2O75830 405 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 UBL3O95164 117 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 TGFAP01135 160 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 HOXB9P17482 250 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-211ENST00000539843 PCMT1P22061 227 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 THBS4P35443 961 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 RBBP4Q09028 425 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 BEND6Q5SZJ8 279 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-211ENST00000539843 KRT80Q6KB66 452 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 PHC2Q8IXK0 858 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 C20orf196Q8IYI0 205 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 TMEM123Q8N131 208 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 SLC26A7Q8TE54 656 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 BPESC1Q9GZL8 116 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 GMEB1Q9Y692 573 aa13.26□□□□□ -0.29
UBE3B-211ENST00000539843 IGKV1D-42A0A075B6H8 117 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 IGHV4-61A0A0C4DH41 118 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 SH3PXD2BA1X283 911 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 SLC35F4A4IF30 521 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 M0R233 179 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 FMO6PO60774 539 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 SEC14L2O76054 403 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 STAMBPO95630 424 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 HIST1H2ABP04908 130 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 CELA3BP08861 270 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 GPX2P18283 190 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 IGFBP5P24593 272 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 CSNK1A1P48729 337 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 ADRM1Q16186 407 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 PAGE3Q5JUK9 113 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 FAM120AOSQ5T036 256 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 INTS11Q5TA45 600 aaKnown RBP13.25□□□□□ -0.29
UBE3B-211ENST00000539843 ZNF613Q6PF04 617 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 HIST3H2AQ7L7L0 130 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 PXKQ7Z7A4 578 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 DHDDSQ86SQ9 333 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 LSRQ86X29 649 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-211ENST00000539843 FUNDC1Q8IVP5 155 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 MSRB3Q8IXL7 192 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 OR5J2Q8NH18 312 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 RASSF5Q8WWW0 418 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 HPS1Q92902 700 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms