RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 LANCL3Q6ZV70 420 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TPRA1Q86W33 373 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TMEM17Q86X19 198 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 C9orf40Q8IXQ3 194 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 OR2L13Q8N349 312 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ICA1LQ8NDH6 482 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 MRPL48Q96GC5 212 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CFAP53Q96M91 514 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ECSITQ9BQ95 431 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 CHRNA10Q9GZZ6 450 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ADNPQ9H2P0 1102 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ANKRD19PQ9H560 264 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ANKRA2Q9H9E1 313 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ELL3Q9HB65 397 aaPredicted RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 LYARQ9NX58 379 aaKnown RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 ABCD2Q9UBJ2 740 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 LCMT1Q9UIC8 334 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TET2Q6N021 2002 aaPredicted RBP0.79□□□□□ -2.28
HIF1A-204ENST00000539097 SBF1O95248 1867 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 GTF3C1Q12789 2109 aa0.79□□□□□ -2.28
HIF1A-204ENST00000539097 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 TTC21AQ8NDW8 1320 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 CABIN1Q9Y6J0 2220 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 RYR1P21817 5038 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 NDUFAF8A1L188 74 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 GFYI3L273 518 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 K7EQM0 130 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 SGK1O00141 431 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PEX7O00628 323 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 DUX1O43812 170 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 IGHV3-48P01763 117 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ANXA3P12429 323 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 NAMPTP43490 491 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 RPS9P46781 194 aaKnown RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 NOVP48745 357 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 MFAP2P55001 183 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 CSNK1G2P78368 415 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 RBBP4Q09028 425 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 EGFEM1PQ0D2K5 195 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 GK3PQ14409 553 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PDK4Q16654 411 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 EXOC3L4Q17RC7 722 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ATP6AP1LQ52LC2 224 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 TP53I3Q53FA7 332 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ACER2Q5QJU3 275 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 UFSP1Q6NVU6 142 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF544Q6NX49 715 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 TMEM107Q6UX40 140 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 CATSPER3Q86XQ3 398 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 Q8N377 158 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 AGR3Q8TD06 166 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 C7orf33Q8WU49 177 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ACOT11Q8WXI4 607 aaPredicted RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 CACNG8Q8WXS5 425 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 RAPGEF5Q92565 580 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 THRSPQ92748 146 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 MRGPRFQ96AM1 343 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 LRRC58Q96CX6 371 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 SIGLEC12Q96PQ1 595 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF607Q96SK3 696 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ROPN1BQ9BZX4 212 aaPredicted RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PNNQ9H307 717 aaKnown RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 NHEJ1Q9H9Q4 299 aaPredicted RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 UBE2TQ9NPD8 197 aaPredicted RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 UBQLN4Q9NRR5 601 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 HYPKQ9NX55 129 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 MS4A12Q9NXJ0 267 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 IL37Q9NZH6 218 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ACOT9Q9Y305 439 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 BAZ2AQ9UIF9 1905 aaKnown RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 MN1Q10571 1320 aaPredicted RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 EHBP1L1Q8N3D4 1523 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 KIAA0556O60303 1618 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 NUP188Q5SRE5 1749 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ARHGEF28Q8N1W1 1705 aaKnown RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 VWA8A3KMH1 1905 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 IGLV8-61A0A075B6I0 122 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 IGLV3-22A0A075B6J6 115 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 BTBD17A6NE02 478 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 IGLON5A6NGN9 336 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF705EA8MWA4 302 aaPredicted RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 CASKO14936 926 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ZMPSTE24O75844 475 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PIGRP01833 764 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PNMA6AP0CW24 399 aaPredicted RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 FOLR2P14207 255 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 IGLL1P15814 213 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PSMA5P28066 241 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 IFNA8P32881 189 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 HPCAL1P37235 193 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 TGM4P49221 684 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 CASP4P49662 377 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 SUCLG1P53597 346 aaKnown RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 RGS8P57771 180 aaPredicted RBP0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PLD1Q13393 1074 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ART3Q13508 389 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 DOC2AQ14183 400 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 PRR5LQ6MZQ0 368 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 ACSM5Q6NUN0 579 aa0.78□□□□□ -2.28
HIF1A-204ENST00000539097 GPRIN3Q6ZVF9 776 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms