RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 NPIPB4C9JG80 1138 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 GSTA4O15217 222 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 RAD51DO75771 328 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 OR7A10O76100 309 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
CD9-208ENST00000538834 CALB2P22676 271 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 GTF2E2P29084 291 aaKnown RBP12.01□□□□□ -0.49
CD9-208ENST00000538834 ZNF133P52736 654 aaPredicted RBP12.01□□□□□ -0.49
CD9-208ENST00000538834 VLDLRP98155 873 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 PRKCDQ05655 676 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 PPA1Q15181 289 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 HIST3H3Q16695 136 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 NIPAL3Q6P499 406 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 ABHD12BQ7Z5M8 362 aaPredicted RBP12.01□□□□□ -0.49
CD9-208ENST00000538834 UEVLDQ8IX04 471 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 RNF113BQ8IZP6 322 aaKnown RBP12.01□□□□□ -0.49
CD9-208ENST00000538834 UBE2J2Q8N2K1 259 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 LRRC75AQ8NAA5 344 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 OR1K1Q8NGR3 316 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 PIP5K1AQ99755 562 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 GPR35Q9HC97 309 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 CRNNQ9UBG3 495 aaPredicted RBP12.01□□□□□ -0.49
CD9-208ENST00000538834 UPB1Q9UBR1 384 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 MAGEL2Q9UJ55 1249 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 HIF3AQ9Y2N7 669 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 A0A1W2PRQ8 180 aa12□□□□□ -0.49
CD9-208ENST00000538834 SLC35F4A4IF30 521 aa12□□□□□ -0.49
CD9-208ENST00000538834 ARPC2O15144 300 aa12□□□□□ -0.49
CD9-208ENST00000538834 ZNF682O95780 498 aa12□□□□□ -0.49
CD9-208ENST00000538834 RAF1P04049 648 aa12□□□□□ -0.49
CD9-208ENST00000538834 ADORA3P0DMS8 318 aa12□□□□□ -0.49
CD9-208ENST00000538834 PAX1P15863 534 aa12□□□□□ -0.49
CD9-208ENST00000538834 RHCEP18577 417 aa12□□□□□ -0.49
CD9-208ENST00000538834 FUT1P19526 365 aa12□□□□□ -0.49
CD9-208ENST00000538834 MSX2P35548 267 aaPredicted RBP12□□□□□ -0.49
CD9-208ENST00000538834 POU3F1Q03052 451 aaPredicted RBP12□□□□□ -0.49
CD9-208ENST00000538834 TGFBR3Q03167 851 aa12□□□□□ -0.49
CD9-208ENST00000538834 DGCR6Q14129 220 aa12□□□□□ -0.49
CD9-208ENST00000538834 TRAM2Q15035 370 aa12□□□□□ -0.49
CD9-208ENST00000538834 ACKR1Q16570 336 aa12□□□□□ -0.49
CD9-208ENST00000538834 C3orf36Q3SXR2 165 aa12□□□□□ -0.49
CD9-208ENST00000538834 ZNF704Q6ZNC4 412 aaPredicted RBP12□□□□□ -0.49
CD9-208ENST00000538834 RINLQ6ZS11 566 aa12□□□□□ -0.49
CD9-208ENST00000538834 TMPRSS11FQ6ZWK6 438 aa12□□□□□ -0.49
CD9-208ENST00000538834 WFDC8Q8IUA0 241 aa12□□□□□ -0.49
CD9-208ENST00000538834 FAM169BQ8N8A8 192 aa12□□□□□ -0.49
CD9-208ENST00000538834 OR6X1Q8NH79 312 aa12□□□□□ -0.49
CD9-208ENST00000538834 RNF217Q8TC41 542 aa12□□□□□ -0.49
CD9-208ENST00000538834 SLC7A13Q8TCU3 470 aa12□□□□□ -0.49
CD9-208ENST00000538834 ACOT11Q8WXI4 607 aaPredicted RBP12□□□□□ -0.49
CD9-208ENST00000538834 TMEM54Q969K7 222 aa12□□□□□ -0.49
CD9-208ENST00000538834 FAM162AQ96A26 154 aa12□□□□□ -0.49
CD9-208ENST00000538834 PYURFQ96I23 114 aa12□□□□□ -0.49
CD9-208ENST00000538834 ADAD1Q96M93 576 aaKnown RBP12□□□□□ -0.49
CD9-208ENST00000538834 ZNF75AQ96N20 296 aa12□□□□□ -0.49
CD9-208ENST00000538834 MRPL13Q9BYD1 178 aaKnown RBP12□□□□□ -0.49
CD9-208ENST00000538834 NMNAT1Q9HAN9 279 aaPredicted RBP12□□□□□ -0.49
CD9-208ENST00000538834 NGBQ9NPG2 151 aa12□□□□□ -0.49
CD9-208ENST00000538834 OBP2BQ9NPH6 170 aa12□□□□□ -0.49
CD9-208ENST00000538834 MED29Q9NX70 200 aa12□□□□□ -0.49
CD9-208ENST00000538834 ACTR3BQ9P1U1 418 aa12□□□□□ -0.49
CD9-208ENST00000538834 SAMD4AQ9UPU9 718 aaKnown RBP12□□□□□ -0.49
CD9-208ENST00000538834 AMDHD2Q9Y303 409 aa12□□□□□ -0.49
CD9-208ENST00000538834 MED31Q9Y3C7 131 aa12□□□□□ -0.49
CD9-208ENST00000538834 FLNAP21333 2647 aaKnown RBP12□□□□□ -0.49
CD9-208ENST00000538834 TCRBV5S2A0A599 114 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 CIB4A0PJX0 185 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 SHISA9B4DS77 424 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 ZNF587BE7ETH6 402 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 PIP5K1CO60331 668 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 SLC43A1O75387 559 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 DANCRP0C864 163 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 NQO1P15559 274 aaKnown RBP11.99□□□□□ -0.49
CD9-208ENST00000538834 MAKP20794 623 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 PAX7P23759 505 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 YAP1P46937 504 aaKnown RBP11.99□□□□□ -0.49
CD9-208ENST00000538834 SH3BGRP55822 239 aaPredicted RBP11.99□□□□□ -0.49
CD9-208ENST00000538834 ROR2Q01974 943 aaKnown RBP11.99□□□□□ -0.49
CD9-208ENST00000538834 RPL18Q07020 188 aaKnown RBP11.99□□□□□ -0.49
CD9-208ENST00000538834 BSPH1Q075Z2 132 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 ANKDD1AQ495B1 522 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 SLC35D2Q76EJ3 337 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 TRPM8Q7Z2W7 1104 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 PIWIL3Q7Z3Z3 882 aaKnown RBP11.99□□□□□ -0.49
CD9-208ENST00000538834 KRTAP1-3Q8IUG1 177 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 ZNF611Q8N823 705 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 BCAS4Q8TDM0 211 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 NMD3Q96D46 503 aaKnown RBP11.99□□□□□ -0.49
CD9-208ENST00000538834 MUCL1Q96DR8 90 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 SGTBQ96EQ0 304 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 ALKBH3Q96Q83 286 aaPredicted RBP11.99□□□□□ -0.49
CD9-208ENST00000538834 ALPK1Q96QP1 1244 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 EMC6Q9BV81 110 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 CCM2LQ9NUG4 571 aaPredicted RBP11.99□□□□□ -0.49
CD9-208ENST00000538834 B3GNT2Q9NY97 397 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 PLEKHA6Q9Y2H5 1048 aa11.99□□□□□ -0.49
CD9-208ENST00000538834 CENPBD1B2RD01 187 aa11.98□□□□□ -0.49
CD9-208ENST00000538834 KPNA4O00629 521 aaPredicted RBP11.98□□□□□ -0.49
CD9-208ENST00000538834 HS3ST1O14792 307 aa11.98□□□□□ -0.49
CD9-208ENST00000538834 AKAP8O43823 692 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms