RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 ZNF750Q32MQ0 723 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 MOGAT2Q3SYC2 334 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 PRAMEF17Q5VTA0 474 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 BTNL8Q6UX41 500 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 MEPCEQ7L2J0 689 aaKnown RBP11.41□□□□□ -0.58
USP3-203ENST00000538686 FCRLAQ7L513 359 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 TAF8Q7Z7C8 310 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 SLC38A5Q8WUX1 472 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 MRGPRX4Q96LA9 322 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 PACRGQ96M98 296 aaPredicted RBP11.41□□□□□ -0.58
USP3-203ENST00000538686 SLC17A9Q9BYT1 436 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 ZNF350Q9GZX5 532 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 OR51B6Q9H340 312 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 IL21RQ9HBE5 538 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 CUTCQ9NTM9 273 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 NOD1Q9Y239 953 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 AKT3Q9Y243 479 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 AK6Q9Y3D8 172 aaKnown RBP11.41□□□□□ -0.58
USP3-203ENST00000538686 CCDC88CQ9P219 2028 aa11.41□□□□□ -0.58
USP3-203ENST00000538686 TMEM269A0A1B0GVZ9 245 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 SLC5A10A0PJK1 596 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 UNC119BA6NIH7 251 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 FAM183AA6NL82 134 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 PHOX2AO14813 284 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 HOXA2O43364 376 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 XRCC3O43542 346 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 SYT7O43581 403 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 GLSO94925 669 aaPredicted RBP11.4□□□□□ -0.58
USP3-203ENST00000538686 OR2C1O95371 312 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 AIFM1O95831 613 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 RPLP1P05386 114 aaKnown RBP11.4□□□□□ -0.58
USP3-203ENST00000538686 C8GP07360 202 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 CTSLP07711 333 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 CDK2P24941 298 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 ATP1B3P54709 279 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 ZNF763Q0D2J5 394 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 PDE7AQ13946 482 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 ATXN7L3Q14CW9 347 aaPredicted RBP11.4□□□□□ -0.58
USP3-203ENST00000538686 SDHAF4Q5VUM1 108 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 MED27Q6P2C8 311 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 SLC22A25Q6T423 547 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 SLC24A4Q8NFF2 622 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 OR2T33Q8NG76 320 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 OR4K1Q8NGD4 311 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 OR2A12Q8NGT7 310 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 C22orf15Q8WYQ4 148 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 FOXRED1Q96CU9 486 aaPredicted RBP11.4□□□□□ -0.58
USP3-203ENST00000538686 TMEM19Q96HH6 336 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 IP6K3Q96PC2 410 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 SNHG12Q9BXW3 62 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 PARD6AQ9NPB6 346 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 ATG4BQ9Y4P1 393 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 UPK3BL1B0FP48 263 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 C9J4A7 227 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 UPK3BL2E5RIL1 263 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 SFTPBP07988 381 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 DHPSP49366 369 aaPredicted RBP11.4□□□□□ -0.58
USP3-203ENST00000538686 IRF8Q02556 426 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 TUSC3Q13454 348 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 DEFB115Q30KQ5 88 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 LRRC37A5PQ49AS3 106 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 C14orf28Q4W4Y0 310 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 ZNF385BQ569K4 471 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 FKBP1CQ5VVH2 108 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 PWWP2BQ6NUJ5 590 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 ARMC6Q6NXE6 501 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 NIPAL3Q6P499 406 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 TNFAIP8L2Q6P589 184 aaPredicted RBP11.4□□□□□ -0.58
USP3-203ENST00000538686 RBM45Q8IUH3 476 aaKnown RBP11.4□□□□□ -0.58
USP3-203ENST00000538686 TMEM86AQ8N2M4 240 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 PAQR4Q8N4S7 273 aaPredicted RBP11.4□□□□□ -0.58
USP3-203ENST00000538686 C17orf47Q8NEP4 570 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 OR10H4Q8NGA5 316 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 OR13C8Q8NGS7 320 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 MVB12AQ96EY5 273 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 PCED1BQ96HM7 432 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 DERL3Q96Q80 235 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 STACQ99469 402 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 OR14J1Q9UGF5 321 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 ZNF214Q9UL59 606 aaPredicted RBP11.4□□□□□ -0.58
USP3-203ENST00000538686 HDGFL3Q9Y3E1 203 aa11.4□□□□□ -0.58
USP3-203ENST00000538686 A0A1W2PPQ1 181 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 ANTXRLA6NF34 631 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 SLC22A31A6NKX4 558 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 A8MXE2 369 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 H0YIV9 168 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 SOCS6O14544 535 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 TP53I11O14683 189 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 OGG1O15527 345 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 DAOP14920 347 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 PGAM2P15259 253 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 KCNE1P15382 129 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 ACVR1BP36896 505 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 SLBPQ14493 270 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP3-203ENST00000538686 UBE2V2Q15819 145 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 RPS26P11Q5JNZ5 115 aaPredicted RBP11.39□□□□□ -0.59
USP3-203ENST00000538686 CLEC12AQ5QGZ9 265 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 ZNF529Q6P280 563 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 VRK2Q86Y07 508 aa11.39□□□□□ -0.59
USP3-203ENST00000538686 ZNF683Q8IZ20 524 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms