RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 GPR171O14626 319 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SURF4O15260 269 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 IGHG3P01860 377 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TP53P04637 393 aaPredicted RBP9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 FCGR2AP12318 317 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CPN1P15169 458 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 IFNGR1P15260 489 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SDHAP31040 664 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 UQCRC1P31930 480 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CASP6P55212 293 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 BIDP55957 195 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PER3P56645 1201 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CLDN17P56750 224 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CLDN18P56856 261 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CD47Q08722 323 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 C19orf57Q0VDD7 668 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CDK5R2Q13319 367 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ITGADQ13349 1161 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 KRR1Q13601 381 aaKnown RBP9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 MELKQ14680 651 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 MAD2L1BPQ15013 274 aaPredicted RBP9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PON3Q15166 354 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ACKR1Q16570 336 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 MS4A18Q3C1V0 323 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 EMC4Q5J8M3 183 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CARD17Q5XLA6 110 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 FAM205BPQ63HN1 556 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CXXC5Q7LFL8 322 aaKnown RBP9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 GGNQ86UU5 652 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CPOQ8IVL8 374 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 MARVELD2Q8N4S9 558 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ADPRHL1Q8NDY3 354 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 OR6N1Q8NGY5 312 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CNIH3Q8TBE1 160 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TMEM163Q8TC26 289 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 FAR1Q8WVX9 515 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RASD2Q96D21 266 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ZNF845Q96IR2 970 aaPredicted RBP9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 Q96M85 177 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 GPR137Q96N19 417 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SRXN1Q9BYN0 137 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CCDC90BQ9GZT6 254 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ENKD1Q9H0I2 346 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TXNIPQ9H3M7 391 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 NRIP3Q9NQ35 241 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 KLHL9Q9P2J3 617 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 GPR52Q9Y2T5 361 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ADAM18Q9Y3Q7 739 aa9.54□□□□□ -0.88
TNFRSF1A-211ENST00000538363 OR14I1A6ND48 311 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SLC22A20A6NK97 555 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 AHRRA9YTQ3 701 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PTGES3LE9PB15 166 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 M0R129 80 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PRRG2O14669 202 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ARPC3O15145 178 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 HLA-DQA2P01906 255 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 NR2C1P13056 603 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 APEHP13798 732 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 HIST1H1CP16403 213 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 FMO3P31513 532 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 AGFG1P52594 562 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CHN2P52757 468 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SNRPGP62308 76 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RPS4XP62701 263 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 LY6DQ14210 128 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RBM48Q5RL73 367 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TMEM201Q5SNT2 666 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 C6orf141Q5SZD1 244 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 LCN1P1Q5VSP4 162 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PLBD1Q6P4A8 553 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 DNM1P34Q6PK57 102 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 AAED1Q7RTV5 226 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 GID4Q8IVV7 300 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CHERPQ8IWX8 916 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ENTHD1Q8IYW4 607 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 STX19Q8N4C7 294 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ARIH2OSQ8N7S6 290 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CYB561A3Q8NBI2 242 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ZNF540Q8NDQ6 660 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SDR9C7Q8NEX9 313 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 OR9K2Q8NGE7 335 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 MYDGFQ969H8 173 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 UBE2FQ969M7 185 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ZNF775Q96BV0 537 aaPredicted RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 WDYHV1Q96HA8 205 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 LRR1Q96L50 414 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 TSPAN32Q96QS1 320 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 NR1H4Q96RI1 486 aaPredicted RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 UCN2Q96RP3 112 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 NMNAT3Q96T66 252 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SF3B5Q9BWJ5 86 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 YTHDF1Q9BYJ9 559 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SRA1Q9HD15 236 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 B3GAT2Q9NPZ5 323 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CMC2Q9NRP2 79 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PARPBPQ9NWS1 579 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CHCHD3Q9NX63 227 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 DNAJC27Q9NZQ0 273 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SPRR3Q9UBC9 169 aa9.53□□□□□ -0.88
TNFRSF1A-211ENST00000538363 NOSIPQ9Y314 301 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms