RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 OR8G1Q15617 311 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 SAXO2Q658L1 398 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 EIF5AL1Q6IS14 154 aaKnown RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 DPY19L2P2Q6ZN68 376 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 MARVELD2Q8N4S9 558 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 STEAP2Q8NFT2 490 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 PIGTQ969N2 578 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 TIMD4Q96H15 378 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 ZNF587Q96SQ5 575 aaPredicted RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 SLC29A1Q99808 456 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 OR11A1Q9GZK7 315 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CRLF2Q9HC73 371 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 EMC7Q9NPA0 242 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 TMEM9Q9P0T7 183 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 FBXL4Q9UKA2 621 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 C19orf53Q9UNZ5 99 aaPredicted RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 ASB1Q9Y576 335 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 KIAA0100Q14667 2235 aaKnown RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 SOCS6O14544 535 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 TOXO94900 526 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 FAM157BP0CG42 384 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 ITGAMP11215 1152 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 MSR1P21757 451 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 NFYBP25208 207 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CX3CR1P49238 355 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 VEGFCP49767 419 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 FAM69AQ5T7M9 428 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 FBXW12Q6X9E4 464 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CD163Q86VB7 1156 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 RBM45Q8IUH3 476 aaKnown RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 OR1L3Q8NH93 324 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CREB3L1Q96BA8 519 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 FOXRED1Q96CU9 486 aaPredicted RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 CMSS1Q9BQ75 279 aaKnown RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 CHST11Q9NPF2 352 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 H7C2Y5 167 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 DPM1O60762 260 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 NDUFB7P17568 137 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 DRD5P21918 477 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 TUBG1P23258 451 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CDK2P24941 298 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 NXPH1P58417 271 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 HSF1Q00613 529 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 FOXK2Q01167 660 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 IHHQ14623 411 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 ZNF385BQ569K4 471 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 OR2G6Q5TZ20 316 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 PGAP1Q75T13 922 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 BCDIN3DQ7Z5W3 292 aaKnown RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 OR5T1Q8NG75 326 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 LINC00615Q96LM1 132 aaPredicted RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 SGPP1Q9BX95 441 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CFHR5Q9BXR6 569 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 EGLN1Q9GZT9 426 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 OR51E2Q9H255 320 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 UFSP2Q9NUQ7 469 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 MOKQ9UQ07 419 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 ZNF281Q9Y2X9 895 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 hCG_1809904A0A1W2PP81 198 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 A0A1W2PPE2 198 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 A0A1W2PR64 198 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 A0A1W2PRV1 198 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 PMS2P1A4D2B8 440 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 QDPRP09417 244 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 SLC2A1P11166 492 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 B4GALNT1Q00973 533 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 NHSL2Q5HYW2 709 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 ZNF691Q5VV52 312 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 TPRA1Q86W33 373 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 SGPP2Q8IWX5 399 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 DMBX1Q8NFW5 382 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 OR13C9Q8NGT0 318 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 ZNF420Q8TAQ5 688 aaPredicted RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 C11orf40Q8WZ69 217 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 SDF2Q99470 211 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 HES7Q9BYE0 225 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 ABCG5Q9H222 651 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 TUBB1Q9H4B7 451 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 RANBP3Q9H6Z4 567 aaPredicted RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 CORINQ9Y5Q5 1042 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CDHR4A6H8M9 788 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 RAB27BO00194 218 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 HMGN4O00479 90 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CRYABP02511 175 aaKnown RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 CDK1P06493 297 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 PRKACBP22694 351 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 DAPP51397 102 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 IDH3GP51553 393 aaPredicted RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 TRA2AQ13595 282 aaKnown RBP eCLIP4.92□□□□□ -1.62
LRP6-203ENST00000538239 GPR157Q5UAW9 335 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 STOML3Q8TAV4 291 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 HAVCR2Q8TDQ0 301 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 SLC25A43Q8WUT9 341 aaPredicted RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 SDSLQ96GA7 329 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 GNG12Q9UBI6 72 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 STEAP1Q9UHE8 339 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 NUMA1Q14980 2115 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 ADAMTS7Q9UKP4 1686 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 C5orf49A4QMS7 147 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CD300LBA8K4G0 201 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms