RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 MALRD1Q5VYJ5 2156 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 PLXNA2O75051 1894 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 OR6C76A6NM76 312 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 J3QKU1 62 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 NDUFB2O95178 105 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 THRBP10828 461 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ETS2P15036 469 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ATP4BP51164 291 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 CDH15P55291 814 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 SLC35A1P78382 337 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ROR2Q01974 943 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 RPL18Q07020 188 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 KIAA2026Q5HYC2 2103 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ZNF385CQ66K41 422 aaPredicted RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 FAM220AQ7Z4H9 259 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 MAPK1IP1LQ8NDC0 245 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 OR5D18Q8NGL1 313 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 DNAJC9Q8WXX5 260 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 DVL3Q92997 716 aaPredicted RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 METTL2AQ96IZ6 378 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 MPP4Q96JB8 637 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 OBP2BQ9NPH6 170 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 TNFRSF19Q9NS68 423 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 EMC3Q9P0I2 261 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 SMG1Q96Q15 3661 aaKnown RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 PLSCR5A0PG75 271 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 ADAP00813 363 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 GUSBP08236 651 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 C7P10643 843 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 RHCEP18577 417 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 LAP3P28838 519 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 EPHA2P29317 976 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 SLC34A1Q06495 639 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 TIGD6Q17RP2 521 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 ZNF791Q3KP31 576 aaPredicted RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 H1FNTQ75WM6 255 aaPredicted RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 OR2T33Q8NG76 320 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 OR2M3Q8NG83 312 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 SPRYD4Q8WW59 207 aaPredicted RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 PNPLA2Q96AD5 504 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 C1GALT1C1Q96EU7 318 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 CENPNQ96H22 339 aaPredicted RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 TGIF2Q9GZN2 237 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 NUAK2Q9H093 628 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 DCAF13Q9NV06 445 aaKnown RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 CLN6Q9NWW5 311 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 NDUFAF4Q9P032 175 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 HEATR5AQ86XA9 2040 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 PLXND1Q9Y4D7 1925 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 WISP1O95388 367 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 H2BFMP0C1H6 154 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 TBXA2RP21731 343 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 SRD5A2P31213 254 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 SELENBP1Q13228 472 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 ITGADQ13349 1161 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 NPTX1Q15818 432 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 SLC27A4Q6P1M0 643 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 SLC46A3Q7Z3Q1 461 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 NFAM1Q8NET5 270 aaPredicted RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 ZNF675Q8TD23 568 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 ACOT11Q8WXI4 607 aaPredicted RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 PHF21AQ96BD5 680 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 HIST1H2AAQ96QV6 131 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 SLC29A1Q99808 456 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 APOL4Q9BPW4 351 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 ZNF350Q9GZX5 532 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 CHCHD2Q9Y6H1 151 aaPredicted RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 CEP192Q8TEP8 1941 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 IGKV3D-11A0A0A0MRZ8 115 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 C5orf49A4QMS7 147 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 GGT3PA6NGU5 568 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 VSTM5A8MXK1 200 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 HSPB6O14558 160 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 ADAM11O75078 769 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 SEMA7AO75326 666 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 IGHG1P01857 330 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 TSPAN19P0C672 248 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 COX6B1P14854 86 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 S1PR1P21453 382 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 HTR1EP28566 365 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 RPS6KA3P51812 740 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 AQP4P55087 323 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 ARF1P84077 181 aaKnown RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 MGAT2Q10469 447 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 APOFQ13790 326 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 PDE7AQ13946 482 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 SMN1Q16637 294 aaKnown RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 SHQ1Q6PI26 577 aaKnown RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 ZNF440Q8IYI8 595 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 C8orf59Q8N0T1 100 aaPredicted RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 C19orf18Q8NEA5 215 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 NEIL3Q8TAT5 605 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 RFT1Q96AA3 541 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 TOR3AQ9H497 397 aa6.49□□□□□ -1.37
MSH6-209ENST00000538136 DNAJB12Q9NXW2 375 aaKnown RBP6.49□□□□□ -1.37
MSH6-209ENST00000538136 B8ZZF3 427 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 SLC43A1O75387 559 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 APLNRP35414 380 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 FOXK2Q01167 660 aa6.48□□□□□ -1.37
MSH6-209ENST00000538136 MFSD13AQ14CX5 517 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms