RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 EFCAB7A8K855 629 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 NPIPA5E9PKD4 350 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 NDUFB6O95139 128 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SLC25A4P12235 298 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ABOP16442 354 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ECH1Q13011 328 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 PDGFRLQ15198 375 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 NUP54Q7Z3B4 507 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 DCXRQ7Z4W1 244 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 OR4N5Q8IXE1 308 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ARIH2OSQ8N7S6 290 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 OR14A16Q8NHC5 309 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SCGB1C1Q8TD33 95 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 METTL21AQ8WXB1 218 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 UBQLN3Q9H347 655 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SRMSQ9H3Y6 488 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 NPIPA1Q9UND3 350 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SF3B6Q9Y3B4 125 aaKnown RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 LTBP1Q14766 1721 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 RALGAPA2Q2PPJ7 1873 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 H0YIV9 168 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 TBX19O60806 448 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ASGR1P07306 291 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF16P17020 682 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 IGFALSP35858 605 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SLC26A5P58743 744 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 C17orf99Q6UX52 265 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 CHRDL2Q6WN34 429 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 RBM45Q8IUH3 476 aaKnown RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 OR1J2Q8NGS2 313 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 OR52I2Q8NH67 350 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 KLK6Q92876 244 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 TOX2Q96NM4 488 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 INTS14Q96SY0 518 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 PRRT1Q99946 306 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 C1QTNF2Q9BXJ5 285 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 MEPEQ9NQ76 525 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 PHPT1Q9NRX4 125 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 KIAA1217Q5T5P2 1943 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 TMEM72A0PK05 275 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 CSTBP04080 98 aaKnown RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 CALCBP10092 127 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 BTF3P20290 206 aaKnown RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 CSNK2A1P68400 391 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 RPL19P84098 196 aaKnown RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 KLF9Q13886 244 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 FAM189A2Q15884 450 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 C22orf39Q6P5X5 142 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SYT9Q86SS6 491 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 CSNK2A3Q8NEV1 391 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 OR6N1Q8NGY5 312 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 TMED6Q8WW62 240 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 GLYATL1Q969I3 302 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 MALSU1Q96EH3 234 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 PRO1933Q9H354 126 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SEC61A2Q9H9S3 476 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ATXN7L1Q9ULK2 861 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 COL4A1P02462 1669 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF860A6NHJ4 632 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 NPIPB9F8W1W9 429 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ADAMTS4O75173 837 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 PRNPP04156 253 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 HOXB5P09067 269 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ST3GAL2Q16842 350 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF792Q3KQV3 632 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ACTBL2Q562R1 376 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 CST9Q5W186 159 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 OR4C11Q6IEV9 310 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 KCNRGQ8N5I3 272 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 OR51S1Q8NGJ8 323 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 GCDHQ92947 438 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 NELFAQ9H3P2 528 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 HRASLSQ9HDD0 168 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 A4GALTQ9NPC4 353 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 MMP26Q9NRE1 261 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 RBPJLQ9UBG7 517 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 IER3IP1Q9Y5U9 82 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 A0A1W2PS29 197 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF850A8MQ14 1090 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 AP4M1O00189 453 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 GJB5O95377 273 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SLC16A8O95907 504 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 F2P00734 622 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 GABRA3P34903 492 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 OR10A3P58181 314 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 RNF4P78317 190 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 TMEM71Q6P5X7 295 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 TRAPPC6BQ86SZ2 158 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 LMNTD1Q8N9Z9 388 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 TOMM40LQ969M1 308 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SUSD3Q96L08 255 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 PAAF1Q9BRP4 392 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 CRLF2Q9HC73 371 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SEMA4GQ9NTN9 838 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SLCO1C1Q9NYB5 712 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 LUZP4Q9P127 313 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 USP36Q9P275 1121 aaKnown RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 CCDC163A0A0D9SF12 145 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 RHOP08100 348 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 CTSOP43234 321 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms