RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 RLN2P04090 185 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 CD3DP04234 171 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 ST6GAL1P15907 406 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 CCKBRP32239 447 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 CTXN1P60606 82 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 COL28A1Q2UY09 1125 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 TMEM196Q5HYL7 178 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 UBE2NLQ5JXB2 153 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 FAM69AQ5T7M9 428 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 TMPRSS11FQ6ZWK6 438 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 ZNF627Q7L945 461 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 MUC20Q8N307 709 aaPredicted RBP12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 CSNK1A1LQ8N752 337 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 UNC13CQ8NB66 2214 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 OR4S1Q8NGB4 309 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 ST8SIA4Q92187 359 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 MOAP1Q96BY2 351 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 TTYH1Q9H313 450 aaPredicted RBP12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 KLHL9Q9P2J3 617 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 POMT2Q9UKY4 750 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 V9GY05 133 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 NBEAQ8NFP9 2946 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 ARL6IP5O75915 188 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 AKR7A3O95154 331 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 IFNGP01579 166 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 ANXA2P07355 339 aaKnown RBP12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 RRASP10301 218 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 GTF2F2P13984 249 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 DEFA5Q01523 94 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 MGAT2Q10469 447 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 TOMM34Q15785 309 aaPredicted RBP12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 SHISA6Q6ZSJ9 500 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 PHOSPHO1Q8TCT1 267 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 FAM46BQ96A09 425 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 MRM2Q9UI43 246 aaKnown RBP12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 KLF15Q9UIH9 416 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 KCNG2Q9UJ96 466 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 FANCMQ8IYD8 2048 aa12.67□□□□□ -0.38
LPCAT3-203ENST00000535479 DCDC2BA2VCK2 349 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 NDUFB2O95178 105 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 GPR75O95800 540 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 NFYAP23511 347 aaPredicted RBP12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 RPS21P63220 83 aaKnown RBP12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 C16orf47Q6ZP98 133 aaPredicted RBP12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 MARCH3Q86UD3 253 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 TPRA1Q86W33 373 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 CDRT4Q8N9R6 151 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 TSEN15Q8WW01 171 aaKnown RBP12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 ANKRD9Q96BM1 317 aaPredicted RBP12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 CMBLQ96DG6 245 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 SGTBQ96EQ0 304 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 KLHL15Q96M94 604 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 GAL3ST4Q96RP7 486 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 LYARQ9NX58 379 aaKnown RBP12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 SLC17A4Q9Y2C5 497 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 COLEC10Q9Y6Z7 277 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 FITM1A5D6W6 292 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 CYR61O00622 381 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 EIF1AYO14602 144 aaKnown RBP12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 TSPAN9O75954 239 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 PBX2P40425 430 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 RPS15AP62244 130 aaKnown RBP12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 PITPNAQ00169 270 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 HLXQ14774 488 aaPredicted RBP12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 SEZ6L2Q6UXD5 910 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 CD163Q86VB7 1156 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 PM20D2Q8IYS1 436 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 KTI12Q96EK9 354 aaPredicted RBP12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 S100A16Q96FQ6 103 aaKnown RBP12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 ZNF75AQ96N20 296 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 KIR3DX1Q9H7L2 352 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 RWDD3Q9Y3V2 267 aa12.66□□□□□ -0.38
LPCAT3-203ENST00000535479 TMEM272A0A1B0GTI8 110 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 ELOA3DA6NLF2 546 aaPredicted RBP12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 METTL12A8MUP2 240 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 F12P00748 615 aaPredicted RBP12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 ZNF28P17035 718 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 EIF1AXP47813 144 aaKnown RBP12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 LTBQ06643 244 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 ELOA3BQ3SY89 546 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 PRSS42Q7Z5A4 293 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 ELOA3Q8NG57 546 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 FLVCR1-AS1Q8TAF5 88 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 RNF166Q96A37 237 aaPredicted RBP12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 RBM18Q96H35 190 aaKnown RBP12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 SERINC2Q96SA4 455 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 ZFYVE21Q9BQ24 234 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 ANKRD19PQ9H560 264 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 SATB2Q9UPW6 733 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 LOC101059948A0A1B0GTJ6 334 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 hCG_1807616A0A1W2PRN6 198 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 B4DGG1 531 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 H0YIG0 161 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 HOXD4P09016 255 aaPredicted RBP12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 FCARP24071 287 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 ARHGAP11AQ6P4F7 1023 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 TMEM88Q6PEY1 159 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 USP53Q70EK8 1073 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 SLITRK4Q8IW52 837 aa12.65□□□□□ -0.38
LPCAT3-203ENST00000535479 CA13Q8N1Q1 262 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms