RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 NPTNQ9Y639 398 aa2.91□□□□□ -1.94
PRKDC-205ENST00000535375 SLIT3O75094 1523 aa2.91□□□□□ -1.94
PRKDC-205ENST00000535375 NSD2O96028 1365 aa2.9□□□□□ -1.94
PRKDC-205ENST00000535375 ZNFX1Q9P2E3 1918 aaKnown RBP2.9□□□□□ -1.95
PRKDC-205ENST00000535375 A0A1B0GVL5 298 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 HSD17B6O14756 317 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 UPK3AO75631 287 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 ATP5LO75964 103 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 GAPDHP04406 335 aaKnown RBP2.9□□□□□ -1.95
PRKDC-205ENST00000535375 ETS2P15036 469 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 NCF2P19878 526 aaPredicted RBP2.9□□□□□ -1.95
PRKDC-205ENST00000535375 GDI1P31150 447 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 EPS15P42566 896 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 GLP1RP43220 463 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 ASPHQ12797 758 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 GK3PQ14409 553 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 ZNF77Q15935 545 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 DUSP7Q16829 419 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 KCTD21Q4G0X4 260 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 PRAMEF5Q5TYX0 476 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 PRAMEF6Q5VXH4 476 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 TIGD3Q6B0B8 471 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 UQCC3Q6UW78 93 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 ENPP6Q6UWR7 440 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 ABHD12BQ7Z5M8 362 aaPredicted RBP2.9□□□□□ -1.95
PRKDC-205ENST00000535375 OR10G3Q8NGC4 313 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 OR9K2Q8NGE7 335 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 AKR7LQ8NHP1 331 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 ZNF596Q8TC21 504 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 FAM110BQ8TC76 370 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 SLC22A8Q8TCC7 542 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 SLC2A14Q8TDB8 520 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 STARD8Q92502 1023 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 TIMD4Q96H15 378 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 C12orf42Q96LP6 360 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 OXGR1Q96P68 337 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 RNF2Q99496 336 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 P2RY13Q9BPV8 354 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 NAT9Q9BTE0 207 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 GPR61Q9BZJ8 451 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 TPK1Q9H3S4 243 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 ANKRD19PQ9H560 264 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 NHEJ1Q9H9Q4 299 aaPredicted RBP2.9□□□□□ -1.95
PRKDC-205ENST00000535375 FOLH1BQ9HBA9 442 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 ETNK2Q9NVF9 386 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 SLC25A37Q9NYZ2 338 aa2.9□□□□□ -1.95
PRKDC-205ENST00000535375 MTCL1Q9Y4B5 1905 aaKnown RBP2.89□□□□□ -1.95
PRKDC-205ENST00000535375 PPIAL4EA0A075B759 164 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 IGKV1D-8A0A087WSZ0 117 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 IGHV1OR21-1A0A087WYE8 117 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 A0A0G2JN53 185 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 TMEM150BA6NC51 233 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 HAS3O00219 553 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 DCTN6O00399 190 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 AGPAT2O15120 278 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 RGS16O15492 202 aaPredicted RBP2.89□□□□□ -1.95
PRKDC-205ENST00000535375 POLR2DO15514 142 aaKnown RBP2.89□□□□□ -1.95
PRKDC-205ENST00000535375 MED7O43513 233 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 CRYGBP07316 175 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 PPIAL4FP0DN26 164 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 CCDC130P13994 396 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 ATP1B2P14415 290 aaPredicted RBP2.89□□□□□ -1.95
PRKDC-205ENST00000535375 CXCR2P25025 360 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 FMO3P31513 532 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 KIR2DS4P43632 304 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 NMUP48645 174 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 PRMT2P55345 433 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 DLX1P56177 255 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 CCNA1P78396 465 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 METAP1DQ6UB28 335 aaPredicted RBP2.89□□□□□ -1.95
PRKDC-205ENST00000535375 ZNF621Q6ZSS3 439 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 CAMK2N1Q7Z7J9 78 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 FAM228AQ86W67 206 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 TGIF2LXQ8IUE1 241 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 TMEM61Q8N0U2 210 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 UBE2J2Q8N2K1 259 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 C6orf223Q8N319 242 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 TPRX1Q8N7U7 411 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 NECAB1Q8N987 351 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 OR52H1Q8NGJ2 320 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 OR9G1Q8NH87 305 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 RAB3IL1Q8TBN0 382 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 ACER1Q8TDN7 264 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 MAIP1Q8WWC4 291 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 RASD2Q96D21 266 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 SEC22AQ96IW7 307 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 IFI27L2Q9H2X8 130 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 REEP4Q9H6H4 257 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 PEX16Q9Y5Y5 336 aa2.89□□□□□ -1.95
PRKDC-205ENST00000535375 GOLGA8OA6NCC3 632 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 BTBD17A6NE02 478 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 FAM47DPA6NHR8 397 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 GOLGA8NF8WBI6 632 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 STAMBPO95630 424 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 TPM2P07951 284 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 HMGB2P26583 209 aaKnown RBP2.88□□□□□ -1.95
PRKDC-205ENST00000535375 CALCRP30988 508 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 RFC4P35249 363 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 CRYBB2P43320 205 aa2.88□□□□□ -1.95
PRKDC-205ENST00000535375 VDAC2P45880 294 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms