RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 TMEM86BQ8N661 226 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 SYNPRQ8TBG9 265 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 MGARPQ8TDB4 240 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 SNX33Q8WV41 574 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 DYRK2Q92630 601 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 SLC47A1Q96FL8 570 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 TSSK3Q96PN8 268 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 DCLRE1CQ96SD1 692 aaKnown RBP6.95□□□□□ -1.3
CLIP1-206ENST00000535290 PATZ1Q9HBE1 687 aaKnown RBP6.95□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF224Q9NZL3 707 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 GPR160Q9UJ42 338 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 CCL27Q9Y4X3 112 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 DYNC2H1Q8NCM8 4307 aaKnown RBP6.94□□□□□ -1.3
CLIP1-206ENST00000535290 SPRY3O43610 288 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 SEC22BO75396 215 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 VAMP5O95183 116 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 PPP1R3DO95685 299 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 IGHV1-46P01743 117 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 IGHV2-70P01814 119 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 KRT16P08779 473 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 OR8G3PP0DMU2 310 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 SDC1P18827 310 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 ANP32AP39687 249 aaKnown RBP6.94□□□□□ -1.3
CLIP1-206ENST00000535290 AQP5P55064 265 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 PKNOX1P55347 436 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 SELENOVP59797 346 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 RPL15P61313 204 aaKnown RBP6.94□□□□□ -1.3
CLIP1-206ENST00000535290 EGR3Q06889 387 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 DBPQ10586 325 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-206ENST00000535290 BNIP2Q12982 314 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 RAB39AQ14964 217 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 SPDYE7PQ495Y7 208 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF584Q8IVC4 421 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 LRRC8AQ8IWT6 810 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 GPR137CQ8N3F9 429 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 ARFGAP2Q8N6H7 521 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 POU5F2Q8N7G0 328 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 ZSCAN4Q8NAM6 433 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-206ENST00000535290 OR56A1Q8NGH5 318 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 OR5AK3PQ8NH89 298 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 PSMA8Q8TAA3 256 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 CNOT9Q92600 299 aaKnown RBP6.94□□□□□ -1.3
CLIP1-206ENST00000535290 PHF21AQ96BD5 680 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 ITPKCQ96DU7 683 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 NEURL3Q96EH8 262 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 DIRC2Q96SL1 478 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF350Q9GZX5 532 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 DPH5Q9H2P9 285 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 OR51B6Q9H340 312 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 MID1IP1Q9NPA3 183 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 SLCO1C1Q9NYB5 712 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 SLC7A8Q9UHI5 535 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 SNX12Q9UMY4 172 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 SLC35A3Q9Y2D2 325 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 NPTNQ9Y639 398 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 POMT1Q9Y6A1 747 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 DOCK11Q5JSL3 2073 aa6.94□□□□□ -1.3
CLIP1-206ENST00000535290 NUP214P35658 2090 aaPredicted RBP6.93□□□□□ -1.3
CLIP1-206ENST00000535290 SLC22A23A1A5C7 686 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 M0R3G1 203 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 PATE4P0C8F1 98 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 UROSP10746 265 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 LAMP1P11279 417 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 CCL2P13500 99 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 IMPDH1P20839 514 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 FUT4P22083 530 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 MAGEA4P43358 317 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF81P51508 661 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 MAP2K6P52564 334 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 ETF1P62495 437 aaKnown RBP6.93□□□□□ -1.3
CLIP1-206ENST00000535290 RAB1AP62820 205 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 KCNJ10P78508 379 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 SLC3A1Q07837 685 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 ARHGAP11BQ3KRB8 267 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 FOXB2Q5VYV0 432 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 TYW3Q6IPR3 259 aaKnown RBP6.93□□□□□ -1.3
CLIP1-206ENST00000535290 LRRN1Q6UXK5 716 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF813Q6ZN06 617 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 C1orf174Q8IYL3 243 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 SPICQ8N5J4 248 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 OR7A2PQ8NGA2 310 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 FGFBP3Q8TAT2 258 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 DCAKDQ8WVC6 231 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 SSMEM1Q8WWF3 244 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 DACT3Q96B18 629 aaPredicted RBP6.93□□□□□ -1.3
CLIP1-206ENST00000535290 MARS2Q96GW9 593 aaKnown RBP6.93□□□□□ -1.3
CLIP1-206ENST00000535290 FAM71F1Q96KD3 344 aaPredicted RBP6.93□□□□□ -1.3
CLIP1-206ENST00000535290 PRPF18Q99633 342 aaKnown RBP6.93□□□□□ -1.3
CLIP1-206ENST00000535290 CCT7Q99832 543 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 C16orf95Q9H693 158 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 TNFRSF12AQ9NP84 129 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 RRAGDQ9NQL2 400 aaPredicted RBP6.93□□□□□ -1.3
CLIP1-206ENST00000535290 EXOSC3Q9NQT5 275 aaKnown RBP6.93□□□□□ -1.3
CLIP1-206ENST00000535290 GAR1Q9NY12 217 aaKnown RBP6.93□□□□□ -1.3
CLIP1-206ENST00000535290 OR5V1Q9UGF6 321 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 RCE1Q9Y256 329 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 RASD1Q9Y272 281 aa6.93□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF816-ZNF321PA0A0X1KG74 233 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 F5H0A9 414 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-206ENST00000535290 TM9SF1O15321 606 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms