RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 ADORA3P0DMS8 318 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 HOXB1P14653 301 aaPredicted RBP18.71■□□□□ 0.59
PKP3-211ENST00000534401 SH3BGRP55822 239 aaPredicted RBP18.71■□□□□ 0.59
PKP3-211ENST00000534401 POU3F1Q03052 451 aaPredicted RBP18.71■□□□□ 0.59
PKP3-211ENST00000534401 STK11Q15831 433 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 C20orf204Q6ZNR8 217 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 ZNF627Q7L945 461 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 DEFB107AQ8IZN7 70 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 FAM156AQ8NDB6 213 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 PIK3C3Q8NEB9 887 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 OR1K1Q8NGR3 316 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 PFN4Q8NHR9 129 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 ALPK1Q96QP1 1244 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 ANKRD19PQ9H560 264 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 GPR35Q9HC97 309 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 OBP2BQ9NPH6 170 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 AMDHD2Q9Y303 409 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 MED31Q9Y3C7 131 aa18.71■□□□□ 0.59
PKP3-211ENST00000534401 SLC35F4A4IF30 521 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 KPNA4O00629 521 aaPredicted RBP18.7■□□□□ 0.58
PKP3-211ENST00000534401 FUT1P19526 365 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 PAX7P23759 505 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 ROR2Q01974 943 aaKnown RBP18.7■□□□□ 0.58
PKP3-211ENST00000534401 BSPH1Q075Z2 132 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 TRAM2Q15035 370 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 PHYHD1Q5SRE7 291 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 C9orf135Q5VTT2 229 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 FKBP9P1Q75LS8 142 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 RNF113BQ8IZP6 322 aaKnown RBP18.7■□□□□ 0.58
PKP3-211ENST00000534401 FAM86B1Q8N7N1 296 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 ZNF611Q8N823 705 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 RBM15BQ8NDT2 890 aaKnown RBP18.7■□□□□ 0.58
PKP3-211ENST00000534401 OR6X1Q8NH79 312 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 SGTBQ96EQ0 304 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 ALKBH3Q96Q83 286 aaPredicted RBP18.7■□□□□ 0.58
PKP3-211ENST00000534401 MED29Q9NX70 200 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 NDUFAF4Q9P032 175 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 MAGEL2Q9UJ55 1249 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 SAMD4AQ9UPU9 718 aaKnown RBP18.7■□□□□ 0.58
PKP3-211ENST00000534401 RNF115Q9Y4L5 304 aa18.7■□□□□ 0.58
PKP3-211ENST00000534401 ARPC4-TTLL3A0A0A6YYG9 625 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 B2RBV5 119 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 HS3ST1O14792 307 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 CD3EP07766 207 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 IFNA8P32881 189 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 LSM11P83369 360 aaKnown RBP eCLIP18.69■□□□□ 0.58
PKP3-211ENST00000534401 DEFB113Q30KQ7 82 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 ANKRD16Q6P6B7 361 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 ARHGAP24Q8N264 748 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 OR52N5Q8NH56 324 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 ACOT11Q8WXI4 607 aaPredicted RBP18.69■□□□□ 0.58
PKP3-211ENST00000534401 ZNF837Q96EG3 531 aaPredicted RBP18.69■□□□□ 0.58
PKP3-211ENST00000534401 DHRS1Q96LJ7 313 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 ADAD1Q96M93 576 aaKnown RBP18.69■□□□□ 0.58
PKP3-211ENST00000534401 EMC6Q9BV81 110 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 FNDC11Q9BVV2 318 aa18.69■□□□□ 0.58
PKP3-211ENST00000534401 BEX4Q9NWD9 120 aaPredicted RBP18.69■□□□□ 0.58
PKP3-211ENST00000534401 TEP1Q99973 2627 aaKnown RBP18.69■□□□□ 0.58
PKP3-211ENST00000534401 MED13LQ71F56 2210 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 A0A087WUU8 490 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 NPIPB13A6NJU9 1138 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 SHISA9B4DS77 424 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 NPIPB4C9JG80 1138 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 TMCC2O75069 709 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 KRT33AO76009 404 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 HIST1H2ABP04908 130 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 IFNGR1P15260 489 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 CALB2P22676 271 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 AHCYP23526 432 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 PTAFRP25105 342 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 YAP1P46937 504 aaKnown RBP18.68■□□□□ 0.58
PKP3-211ENST00000534401 ART1P52961 327 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 PRPS1P60891 318 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 PRKCDQ05655 676 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 FHL1Q13642 323 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 KEAP1Q14145 624 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 TBRG1Q3YBR2 411 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 SLC35D2Q76EJ3 337 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 HIST3H2AQ7L7L0 130 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 GPR137CQ8N3F9 429 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 FAM169BQ8N8A8 192 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 HIST1H2ACQ93077 130 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 TMEM54Q969K7 222 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 SEPHS2Q99611 448 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 NMNAT1Q9HAN9 279 aaPredicted RBP18.68■□□□□ 0.58
PKP3-211ENST00000534401 CRNNQ9UBG3 495 aaPredicted RBP18.68■□□□□ 0.58
PKP3-211ENST00000534401 ITGB1BP2Q9UKP3 347 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 MAGED1Q9Y5V3 778 aaPredicted RBP18.68■□□□□ 0.58
PKP3-211ENST00000534401 USF3Q68DE3 2245 aa18.68■□□□□ 0.58
PKP3-211ENST00000534401 A0A1W2PRQ8 180 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 C11orf98E9PRG8 122 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 ARPC2O15144 300 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 OR6A2O95222 327 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 RHCEP18577 417 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 MSX2P35548 267 aaPredicted RBP18.67■□□□□ 0.58
PKP3-211ENST00000534401 RPS4XP62701 263 aaKnown RBP18.67■□□□□ 0.58
PKP3-211ENST00000534401 ARF1P84077 181 aaKnown RBP18.67■□□□□ 0.58
PKP3-211ENST00000534401 VLDLRP98155 873 aa18.67■□□□□ 0.58
PKP3-211ENST00000534401 RPL18Q07020 188 aaKnown RBP18.67■□□□□ 0.58
PKP3-211ENST00000534401 DGCR6Q14129 220 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms