RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 GRPRP30550 384 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 PIGFQ07326 219 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 MPP2Q14168 576 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 GSG1Q2KHT4 349 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 GTDC1Q4AE62 458 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 CARD17Q5XLA6 110 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 C20orf196Q8IYI0 205 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 RDH5Q92781 318 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 ZNF75AQ96N20 296 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 SYT3Q9BQG1 590 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 C12orf10Q9HB07 376 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 RPS6KB2Q9UBS0 482 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 MGAM2Q2M2H8 2515 aa18.33■□□□□ 0.52
SSH3-211ENST00000534112 WNT9BO14905 357 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 SLC22A3O75751 556 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 MSMBP08118 114 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 SAGP10523 405 aaPredicted RBP18.32■□□□□ 0.52
SSH3-211ENST00000534112 ZNF14P17017 642 aaPredicted RBP18.32■□□□□ 0.52
SSH3-211ENST00000534112 ACHEP22303 614 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 GLRXP35754 106 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 ALDH3B1P43353 468 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 SEC24CP53992 1094 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 TMEM33P57088 247 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 BST1Q10588 318 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 TRMT5Q32P41 509 aaKnown RBP18.32■□□□□ 0.52
SSH3-211ENST00000534112 KRT71Q3SY84 523 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 C5orf46Q6UWT4 87 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 NET1Q7Z628 596 aaPredicted RBP18.32■□□□□ 0.52
SSH3-211ENST00000534112 SLC38A4Q969I6 547 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 VPS33AQ96AX1 596 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 BCL2L10Q9HD36 194 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 TREM2Q9NZC2 230 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 GRIP1Q9Y3R0 1128 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 NOX1Q9Y5S8 564 aa18.32■□□□□ 0.52
SSH3-211ENST00000534112 IGKV1D-42A0A075B6H8 117 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 TRAV36DV7A0A075B6V5 113 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 MS4A18H0YCH9 400 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 RGS16O15492 202 aaPredicted RBP18.31■□□□□ 0.52
SSH3-211ENST00000534112 HPRP00739 348 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 TFP02787 698 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 NUDT7P0C024 238 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 CBLP22681 906 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 COMPP49747 757 aaPredicted RBP18.31■□□□□ 0.52
SSH3-211ENST00000534112 AQP5P55064 265 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 ACTG1P63261 375 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 SCGB2A2Q13296 93 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 MS4A18Q3C1V0 323 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 ZNF813Q6ZN06 617 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 LRP11Q86VZ4 500 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 UEVLDQ8IX04 471 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 ADPRHL1Q8NDY3 354 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 ZNF418Q8TF45 676 aaPredicted RBP18.31■□□□□ 0.52
SSH3-211ENST00000534112 LRR1Q96L50 414 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 LRRC37BQ96QE4 947 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 EMC6Q9BV81 110 aa18.31■□□□□ 0.52
SSH3-211ENST00000534112 A0A1B0GWA3 101 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 RGS9O75916 674 aaPredicted RBP18.3■□□□□ 0.52
SSH3-211ENST00000534112 GAAP10253 952 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 HLA-DOBP13765 273 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 IDO1P14902 403 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 MAD2L1BPQ15013 274 aaPredicted RBP18.3■□□□□ 0.52
SSH3-211ENST00000534112 PDCD4Q53EL6 469 aaKnown RBP18.3■□□□□ 0.52
SSH3-211ENST00000534112 GKAP1Q5VSY0 366 aaPredicted RBP18.3■□□□□ 0.52
SSH3-211ENST00000534112 REP15Q6BDI9 236 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 SHQ1Q6PI26 577 aaKnown RBP18.3■□□□□ 0.52
SSH3-211ENST00000534112 ZNF627Q7L945 461 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 LSMEM1Q8N8F7 131 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 OR51F2Q8NH61 342 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 MAL2Q969L2 176 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 YIPF5Q969M3 257 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 ITCHQ96J02 903 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 RSPO3Q9BXY4 272 aaPredicted RBP18.3■□□□□ 0.52
SSH3-211ENST00000534112 RMND5AQ9H871 391 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 ZNF275Q9NSD4 429 aaPredicted RBP18.3■□□□□ 0.52
SSH3-211ENST00000534112 KLHL14Q9P2G3 628 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 MYEF2Q9P2K5 600 aaKnown RBP18.3■□□□□ 0.52
SSH3-211ENST00000534112 FZR1Q9UM11 496 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 POFUT2Q9Y2G5 429 aa18.3■□□□□ 0.52
SSH3-211ENST00000534112 HDAC3O15379 428 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 ERLIN1O75477 346 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 NQO1P15559 274 aaKnown RBP18.29■□□□□ 0.52
SSH3-211ENST00000534112 EGR1P18146 543 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 HTR2AP28223 471 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 PTDSS1P48651 473 aaKnown RBP18.29■□□□□ 0.52
SSH3-211ENST00000534112 LMO4P61968 165 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 MRPS11P82912 194 aaKnown RBP18.29■□□□□ 0.52
SSH3-211ENST00000534112 MFSD13AQ14CX5 517 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 FXNQ16595 210 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 FAHD2BQ6P2I3 314 aaPredicted RBP18.29■□□□□ 0.52
SSH3-211ENST00000534112 NHLRC1Q6VVB1 395 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 C3orf56Q8N813 242 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 DNAJA4Q8WW22 397 aaPredicted RBP18.29■□□□□ 0.52
SSH3-211ENST00000534112 FAHD2AQ96GK7 314 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 SLC41A3Q96GZ6 507 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 TXNDC15Q96J42 360 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 DENND2DQ9H6A0 471 aaPredicted RBP18.29■□□□□ 0.52
SSH3-211ENST00000534112 A4GALTQ9NPC4 353 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 B3GAT2Q9NPZ5 323 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 ZNF224Q9NZL3 707 aa18.29■□□□□ 0.52
SSH3-211ENST00000534112 A0A087WUJ7 227 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms