RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 MS4A18Q3C1V0 323 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 TTMPQ5BVD1 217 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 CYB5R2Q6BCY4 276 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 TUBA1AQ71U36 451 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 HDXQ7Z353 690 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 SLC46A3Q7Z3Q1 461 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 COMTD1Q86VU5 262 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 SNX32Q86XE0 403 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 C10orf53Q8N6V4 93 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 NUP37Q8NFH4 326 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 TSPEARQ8WU66 669 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 NANOS1Q8WY41 292 aaKnown RBP10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 SLC41A3Q96GZ6 507 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 MAGEB18Q96M61 343 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 ANKRD27Q96NW4 1050 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 OR2M2Q96R28 347 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 VRK1Q99986 396 aaPredicted RBP10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 TMEM43Q9BTV4 400 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 MYOZ1Q9NP98 299 aaPredicted RBP10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 B3GAT2Q9NPZ5 323 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 CDC42EP3Q9UKI2 254 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 NOX1Q9Y5S8 564 aa10.79□□□□□ -0.68
CAPRIN1-213ENST00000533562 M0QX08 132 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 M0R3G1 203 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 TRAF3IP2O43734 574 aaPredicted RBP10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 FMO6PO60774 539 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 MT-ATP6P00846 226 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 ERCC1P07992 297 aaPredicted RBP10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 AHCYP23526 432 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 CAPZA2P47755 286 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 CDH12P55289 794 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 LSM11P83369 360 aaKnown RBP eCLIP10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 PUDPQ08623 228 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 EFNB3Q15768 340 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 ADIPOQQ15848 244 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 C6orf52Q5T4I8 152 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 ZNF613Q6PF04 617 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 VHLLQ6RSH7 139 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 CXXC5Q7LFL8 322 aaKnown RBP10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 PXKQ7Z7A4 578 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 DHDDSQ86SQ9 333 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 SLC30A8Q8IWU4 369 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 C20orf196Q8IYI0 205 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 TMEM123Q8N131 208 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 DPP10Q8N608 796 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 SMYD1Q8NB12 490 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 ZNF540Q8NDQ6 660 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 SPATA3Q8NHX4 192 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 CKAP2Q8WWK9 683 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 ZNF837Q96EG3 531 aaPredicted RBP10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 KCNK17Q96T54 332 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 CGREF1Q99674 301 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 MCHR1Q99705 422 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 CPPED1Q9BRF8 314 aaPredicted RBP10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 SIKE1Q9BRV8 207 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 PIMREGQ9BSJ6 248 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 RAB1BQ9H0U4 201 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 NELFAQ9H3P2 528 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 PLK3Q9H4B4 646 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 MRPL39Q9NYK5 338 aaKnown RBP10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 USP22Q9UPT9 525 aa10.78□□□□□ -0.68
CAPRIN1-213ENST00000533562 SVEP1Q4LDE5 3571 aa10.77□□□□□ -0.68
CAPRIN1-213ENST00000533562 LOC390937A0A1W2PQ73 354 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 SLC35F4A4IF30 521 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 PLPP3O14495 311 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 TPST2O60704 377 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 LY6HO94772 140 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 OR6A2O95222 327 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 HPRP00739 348 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 BGLAPP02818 100 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 VIMP08670 466 aaKnown RBP10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 HLA-DOBP13765 273 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 NPR2P20594 1047 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 CALCRP30988 508 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 IDH3GP51553 393 aaPredicted RBP10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 PCBP3P57721 371 aaKnown RBP10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 POU3F1Q03052 451 aaPredicted RBP10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 NPRL3Q12980 569 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 DUSP7Q16829 419 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 METTL21CQ5VZV1 264 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 CARD17Q5XLA6 110 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 PATL1Q86TB9 770 aaKnown RBP10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 PTOV1Q86YD1 416 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 OR6N1Q8NGY5 312 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 SLC26A7Q8TE54 656 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 THOC1Q96FV9 657 aaKnown RBP10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 SORCS2Q96PQ0 1159 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 EMC6Q9BV81 110 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 BEX2Q9BXY8 128 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 RASSF4Q9H2L5 321 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF442Q9H7R0 627 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 TMEM160Q9NX00 188 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 POFUT2Q9Y2G5 429 aa10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 YLPM1P49750 1951 aaKnown RBP10.77□□□□□ -0.69
CAPRIN1-213ENST00000533562 CHP2O43745 196 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 CD79AP11912 226 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 THBS4P35443 961 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 NR4A2P43354 598 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 GZMKP49863 264 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 PPOXP50336 477 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms