RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 SERPINF1P36955 418 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 KRTAP1-1Q07627 177 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 PUDPQ08623 228 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 MMEL1Q495T6 779 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 ENTPD8Q5MY95 495 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 TTC33Q6PID6 262 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-211ENST00000533492 VHLLQ6RSH7 139 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 PXKQ7Z7A4 578 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 CCDC36Q8IYA8 594 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 TMEM123Q8N131 208 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 ZNF525Q8N782 197 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 FAM169BQ8N8A8 192 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 GPR32P1Q8NGA4 272 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 OR4F15Q8NGB8 312 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 OR6T1Q8NGN1 323 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 OR6N1Q8NGY5 312 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 VANGL1Q8TAA9 524 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-211ENST00000533492 RASSF5Q8WWW0 418 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 ZNF837Q96EG3 531 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-211ENST00000533492 MOGAT1Q96PD6 335 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 SH3GL1Q99961 368 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 TMEM120AQ9BXJ8 343 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 YAE1D1Q9NRH1 226 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 CA10Q9NS85 328 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 MRGBPQ9NV56 204 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 POFUT2Q9Y2G5 429 aa13.44□□□□□ -0.26
CPSF1-211ENST00000533492 LRRN3E7EW58 273 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 PLPP3O14495 311 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 TLX2O43763 284 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-211ENST00000533492 CD5LO43866 347 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 CRLF1O75462 422 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 SERPINI2O75830 405 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 SASH3O75995 380 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 F12P00748 615 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-211ENST00000533492 IGKV3-15P01624 115 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 IGLV1-44P01699 117 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 CSF3P09919 207 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 ADORA3P0DMS8 318 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 SLC25A16P16260 332 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 PCGF2P35227 344 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 ARR3P36575 388 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 IDH3GP51553 393 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-211ENST00000533492 NPRL3Q12980 569 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 CAMK2DQ13557 499 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 SWI5Q1ZZU3 235 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 VMACQ2NL98 169 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 MST1LQ2TV78 715 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 TRMT5Q32P41 509 aaKnown RBP13.43□□□□□ -0.26
CPSF1-211ENST00000533492 NANOGP8Q6NSW7 305 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 LINC00114Q6XXX2 140 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 SNX32Q86XE0 403 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 PRIMA1Q86XR5 153 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 C20orf196Q8IYI0 205 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 OR5J2Q8NH18 312 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 ADAMTS16Q8TE57 1224 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 TXNDC15Q96J42 360 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 LRR1Q96L50 414 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 VRK1Q99986 396 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-211ENST00000533492 ECSITQ9BQ95 431 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 NANOGQ9H9S0 305 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 MED29Q9NX70 200 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 USP22Q9UPT9 525 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 FKBP7Q9Y680 259 aa13.43□□□□□ -0.26
CPSF1-211ENST00000533492 ARFGEF3Q5TH69 2177 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 TRAPPC13A5PLN9 417 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 B9A039 149 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 C11orf98E9PRG8 122 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 SEC14L2O76054 403 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 HIST1H2ABP04908 130 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 OR4A8P0C604 315 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 CD247P20963 164 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 ARFIP2P53365 341 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 NPTX1Q15818 432 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 PHYHD1Q5SRE7 291 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 HIST3H2AQ7L7L0 130 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 SLC46A3Q7Z3Q1 461 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 RBM45Q8IUH3 476 aaKnown RBP13.42□□□□□ -0.26
CPSF1-211ENST00000533492 IL17RDQ8NFM7 739 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 HIST1H2ACQ93077 130 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 TAMM41Q96BW9 452 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 TNFRSF13CQ96RJ3 184 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 NANSQ9NR45 359 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 SLC7A7Q9UM01 511 aa13.42□□□□□ -0.26
CPSF1-211ENST00000533492 SONP18583 2426 aaKnown RBP13.42□□□□□ -0.26
CPSF1-211ENST00000533492 CHD3Q12873 2000 aaKnown RBP13.41□□□□□ -0.26
CPSF1-211ENST00000533492 KPNA4O00629 521 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-211ENST00000533492 FBP2O00757 339 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 GPRIN2O60269 458 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 PDE5AO76074 875 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 LY6HO94772 140 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 CH25HO95992 272 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 CELA3BP08861 270 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 CD79AP11912 226 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 CALCRP30988 508 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 LOXL1Q08397 574 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-211ENST00000533492 SF3A3Q12874 501 aaKnown RBP eCLIP13.41□□□□□ -0.26
CPSF1-211ENST00000533492 MAPRE2Q15555 327 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 ADIPOQQ15848 244 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 ZNF813Q6ZN06 617 aa13.41□□□□□ -0.26
CPSF1-211ENST00000533492 MDP1Q86V88 176 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms