RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 ALG14Q96F25 216 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 CXorf51AA0A1B0GTR3 108 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 IFNA2P01563 188 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 CHRNB1P11230 501 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 SLC35A1P78382 337 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 DUSP8Q13202 625 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 MLC1Q15049 377 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 KCNJ8Q15842 424 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 NKAIN1Q4KMZ8 207 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 FOXB2Q5VYV0 432 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 PLCXD3Q63HM9 321 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 AAED1Q7RTV5 226 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 LYSMD2Q8IV50 215 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 HINT2Q9BX68 163 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 C11orf54Q9H0W9 315 aaPredicted RBP16.16■□□□□ 0.18
PHRF1-205ENST00000533464 ZFP57Q9NU63 452 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 CROCCQ5TZA2 2017 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 ZC3H12DA2A288 527 aaKnown RBP16.16■□□□□ 0.18
PHRF1-205ENST00000533464 RAC2P15153 192 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 SSTR2P30874 369 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 CAMLGP49069 296 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 SLC14A1Q13336 389 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 NIPAL3Q6P499 406 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 SLC43A2Q8N370 569 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 ANKRD53Q8N9V6 530 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 PAPPA2Q9BXP8 1791 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 SSX5O60225 188 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 SLC2A10O95528 541 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 AGAP7PQ5VUJ5 663 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 Q6ZNX1 250 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 ZNF695Q8IW36 515 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 OR4M1Q8NGD0 313 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 SLC43A1O75387 559 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 CD22P20273 847 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 HTR5AP47898 357 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 BTG2P78543 158 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 MEX3BQ6ZN04 569 aaKnown RBP16.16■□□□□ 0.18
PHRF1-205ENST00000533464 CDCA4Q9BXL8 241 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 KNTC1P50748 2209 aa16.16■□□□□ 0.18
PHRF1-205ENST00000533464 IGLV3-16A0A075B6K0 115 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 ASPDHA6ND91 283 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 PEX14O75381 377 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 HLA-AP01891 365 aaKnown RBP16.15■□□□□ 0.18
PHRF1-205ENST00000533464 IRF2P14316 349 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 BDKRB2P30411 391 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 VEGFCP49767 419 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 EGFL6Q8IUX8 553 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 STEAP2Q8NFT2 490 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 WIF1Q9Y5W5 379 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 NSA2O95478 260 aaKnown RBP16.15■□□□□ 0.18
PHRF1-205ENST00000533464 CD1EP15812 388 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 ATP1B3P54709 279 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 YIF1BQ5BJH7 314 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 VWA2Q5GFL6 755 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 MKXQ8IYA7 352 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 FNDC9Q8TBE3 224 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 ACKR4Q9NPB9 350 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 SERPINE2P07093 398 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 CASP6P55212 293 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 SLC35D3Q5M8T2 416 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 MOB3CQ70IA8 216 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 GRINAQ7Z429 371 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 SULF2Q8IWU5 870 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 NICN1Q9BSH3 213 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 NTN4Q9HB63 628 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 PADI1Q9ULC6 663 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 PPIL1Q9Y3C6 166 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 P2RX6O15547 441 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 NKG7Q16617 165 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 EXOSC6Q5RKV6 272 aaKnown RBP16.15■□□□□ 0.18
PHRF1-205ENST00000533464 FAHD1Q6P587 224 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 RAB11FIP2Q7L804 512 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 TDHQ8IZJ6 230 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 CNEP1R1Q8N9A8 125 aa16.15■□□□□ 0.18
PHRF1-205ENST00000533464 METTL17Q9H7H0 456 aaPredicted RBP16.15■□□□□ 0.18
PHRF1-205ENST00000533464 GLYATL2Q8WU03 294 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 SIAEQ9HAT2 523 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 TNFRSF10AO00220 468 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 P2RY10O00398 339 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 EIF4E2O60573 245 aaKnown RBP16.14■□□□□ 0.17
PHRF1-205ENST00000533464 GPX5O75715 221 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 F10P00742 488 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 GCH1P30793 250 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 RUNX2Q13950 521 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 GK2Q14410 553 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-205ENST00000533464 GLYR1Q49A26 553 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-205ENST00000533464 TMEM99Q8N816 258 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 OR51D1Q8NGF3 324 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 OR5D18Q8NGL1 313 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 PSD2Q9BQI7 771 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 SLC17A4Q9Y2C5 497 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 CCR5P51681 352 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 TNK1Q13470 666 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 MPEG1Q2M385 716 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 TRAPPC6BQ86SZ2 158 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 CA13Q8N1Q1 262 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 BCORP1Q8N888 145 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 SPIN2AQ99865 258 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 SPIN2BQ9BPZ2 258 aa16.14■□□□□ 0.17
PHRF1-205ENST00000533464 EHFQ9NZC4 300 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms