RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 OXGR1Q96P68 337 aa6.62□□□□□ -1.35
NXF1-215ENST00000533440 OR2M2Q96R28 347 aa6.62□□□□□ -1.35
NXF1-215ENST00000533440 FMO2Q99518 471 aa6.62□□□□□ -1.35
NXF1-215ENST00000533440 C1orf50Q9BV19 199 aa6.62□□□□□ -1.35
NXF1-215ENST00000533440 RSPO3Q9BXY4 272 aaPredicted RBP6.62□□□□□ -1.35
NXF1-215ENST00000533440 SLC38A1Q9H2H9 487 aa6.62□□□□□ -1.35
NXF1-215ENST00000533440 PLA2G2EQ9NZK7 142 aa6.62□□□□□ -1.35
NXF1-215ENST00000533440 TAAR3PQ9P1P4 343 aa6.62□□□□□ -1.35
NXF1-215ENST00000533440 TESQ9UGI8 421 aaKnown RBP6.62□□□□□ -1.35
NXF1-215ENST00000533440 SLC7A8Q9UHI5 535 aa6.62□□□□□ -1.35
NXF1-215ENST00000533440 POLR3KQ9Y2Y1 108 aaPredicted RBP6.62□□□□□ -1.35
NXF1-215ENST00000533440 CACNG2Q9Y698 323 aa6.62□□□□□ -1.35
NXF1-215ENST00000533440 A0A096LPI6 279 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 LOC102725191A0A1B0GVB3 256 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 TMEM233B4DJY2 109 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 HMGN4O00479 90 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 TIMM23O14925 209 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 FOXH1O75593 365 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 CLPTM1O96005 669 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 KNG1P01042 644 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 CD79AP11912 226 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 CPA3P15088 417 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 UQCRC2P22695 453 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 OMGP23515 440 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 GIPRP48546 466 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 PTDSS1P48651 473 aaKnown RBP6.61□□□□□ -1.35
NXF1-215ENST00000533440 RAB1AP62820 205 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 HPCAP84074 193 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 PIGFQ07326 219 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 ZNF154Q13106 437 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 SYPL1Q16563 259 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 HFEQ30201 348 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 GPAT3Q53EU6 434 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 ZNF362Q5T0B9 420 aaPredicted RBP6.61□□□□□ -1.35
NXF1-215ENST00000533440 MRPL2Q5T653 305 aaKnown RBP6.61□□□□□ -1.35
NXF1-215ENST00000533440 WBP2NLQ6ICG8 309 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 OR4F3Q6IEY1 312 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 RGS7BPQ6MZT1 257 aaPredicted RBP6.61□□□□□ -1.35
NXF1-215ENST00000533440 TMEM154Q6P9G4 183 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 LRRC74BQ6ZQY2 392 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 C9orf139Q6ZV77 190 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 USP51Q70EK9 711 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 ZNF584Q8IVC4 421 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 ZNF440Q8IYI8 595 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 KIR3DL3Q8N743 410 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 GLB1L3Q8NCI6 653 aaPredicted RBP6.61□□□□□ -1.35
NXF1-215ENST00000533440 OR8J2Q8NGG1 315 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 MGARPQ8TDB4 240 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 TRIM44Q96DX7 344 aaPredicted RBP6.61□□□□□ -1.35
NXF1-215ENST00000533440 NEURL3Q96EH8 262 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 TIMD4Q96H15 378 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 LRR1Q96L50 414 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 C3orf30Q96M34 536 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 TRNT1Q96Q11 434 aaKnown RBP6.61□□□□□ -1.35
NXF1-215ENST00000533440 TSPAN32Q96QS1 320 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 CCT8L2Q96SF2 557 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 GAL3ST1Q99999 423 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 RBM4BQ9BQ04 359 aaKnown RBP6.61□□□□□ -1.35
NXF1-215ENST00000533440 PTDSS2Q9BVG9 487 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 GATA5Q9BWX5 397 aaPredicted RBP6.61□□□□□ -1.35
NXF1-215ENST00000533440 MTHFD2LQ9H903 347 aaPredicted RBP6.61□□□□□ -1.35
NXF1-215ENST00000533440 MMP26Q9NRE1 261 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 SEC14L4Q9UDX3 406 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 GPR160Q9UJ42 338 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 MID2Q9UJV3 735 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 PURGQ9UJV8 347 aaKnown RBP6.61□□□□□ -1.35
NXF1-215ENST00000533440 FBXL3Q9UKT7 428 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 AUP1Q9Y679 476 aa6.61□□□□□ -1.35
NXF1-215ENST00000533440 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 A0A1W2PPM1 405 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 SLC22A23A1A5C7 686 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 CDHR4A6H8M9 788 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 TRAPPC2LH3BP13 241 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 M0R3G1 203 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 AHSA1O95433 338 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 RAB36O95755 333 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 C1QCP02747 245 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 SERPINA5P05154 406 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 DBIP07108 87 aaKnown RBP6.6□□□□□ -1.35
NXF1-215ENST00000533440 CHRNGP07510 517 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 GKN3PP0CG01 181 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 G6PDP11413 515 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 IL7RP16871 459 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 ZNF12P17014 697 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 CRHR1P34998 444 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 PCGF2P35227 344 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 CCT5P48643 541 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 CLDN8P56748 225 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 KLF3P57682 345 aaPredicted RBP6.6□□□□□ -1.35
NXF1-215ENST00000533440 SELENOVP59797 346 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 KRTAP10-3P60369 221 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 EGR4Q05215 589 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 GNA13Q14344 377 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 RAB39AQ14964 217 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 MFSD13AQ14CX5 517 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 PGS1Q32NB8 556 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 OLFML2AQ68BL7 652 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 ASPHD2Q6ICH7 369 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 ZNF813Q6ZN06 617 aa6.6□□□□□ -1.35
NXF1-215ENST00000533440 C17orf107Q6ZR85 190 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms