RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 AHCYP23526 432 aa17.94■□□□□ 0.46
CCS-208ENST00000533244 VLDLRP98155 873 aa17.94■□□□□ 0.46
CCS-208ENST00000533244 TRPM8Q7Z2W7 1104 aa17.94■□□□□ 0.46
CCS-208ENST00000533244 NANOGNBQ7Z5D8 188 aa17.94■□□□□ 0.46
CCS-208ENST00000533244 C20orf196Q8IYI0 205 aa17.94■□□□□ 0.46
CCS-208ENST00000533244 ACOT11Q8WXI4 607 aaPredicted RBP17.94■□□□□ 0.46
CCS-208ENST00000533244 LRR1Q96L50 414 aa17.94■□□□□ 0.46
CCS-208ENST00000533244 NSMCE2Q96MF7 247 aa17.94■□□□□ 0.46
CCS-208ENST00000533244 EMC6Q9BV81 110 aa17.94■□□□□ 0.46
CCS-208ENST00000533244 C1orf21Q9H246 121 aa17.94■□□□□ 0.46
CCS-208ENST00000533244 SLC35F4A4IF30 521 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 DPRXA6NFQ7 191 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 C11orf98E9PRG8 122 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 KRT33AO76009 404 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 ATE1O95260 518 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 RAF1P04049 648 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 HIST1H2ABP04908 130 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 UMPSP11172 480 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 IST1P53990 364 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 ROR2Q01974 943 aaKnown RBP17.93■□□□□ 0.46
CCS-208ENST00000533244 TESK1Q15569 626 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 ALKBH2Q6NS38 261 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 ZNF704Q6ZNC4 412 aaPredicted RBP17.93■□□□□ 0.46
CCS-208ENST00000533244 HIST3H2AQ7L7L0 130 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 CYP4Z1Q86W10 505 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 OR1K1Q8NGR3 316 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 OR52N5Q8NH56 324 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 HIST1H2ACQ93077 130 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 PYURFQ96I23 114 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 NELFAQ9H3P2 528 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 ESRP2Q9H6T0 727 aaKnown RBP17.93■□□□□ 0.46
CCS-208ENST00000533244 NMNAT1Q9HAN9 279 aaPredicted RBP17.93■□□□□ 0.46
CCS-208ENST00000533244 GPR35Q9HC97 309 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 EDARQ9UNE0 448 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 PLEKHA6Q9Y2H5 1048 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 AMDHD2Q9Y303 409 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 CADP27708 2225 aa17.93■□□□□ 0.46
CCS-208ENST00000533244 A0A087WUU8 490 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 PLAUP00749 431 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 IFNGR1P15260 489 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 RHCEP18577 417 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 SH3BGRP55822 239 aaPredicted RBP17.92■□□□□ 0.46
CCS-208ENST00000533244 RPL18Q07020 188 aaKnown RBP17.92■□□□□ 0.46
CCS-208ENST00000533244 PHYHD1Q5SRE7 291 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 SLC35D2Q76EJ3 337 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 RNF113BQ8IZP6 322 aaKnown RBP17.92■□□□□ 0.46
CCS-208ENST00000533244 GPR137CQ8N3F9 429 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 MAGEE2Q8TD90 523 aaPredicted RBP17.92■□□□□ 0.46
CCS-208ENST00000533244 MBD6Q96DN6 1003 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 BPIFA2Q96DR5 249 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 DHRS1Q96LJ7 313 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 TAS2R1Q9NYW7 299 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 ACTR3BQ9P1U1 418 aa17.92■□□□□ 0.46
CCS-208ENST00000533244 A0A1W2PRQ8 180 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 RNF13O43567 381 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 IFI30P13284 250 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 CD53P19397 219 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 RPS4XP62701 263 aaKnown RBP17.91■□□□□ 0.46
CCS-208ENST00000533244 PRKCDQ05655 676 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 BSPH1Q075Z2 132 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 FOXD4Q12950 439 aaPredicted RBP17.91■□□□□ 0.46
CCS-208ENST00000533244 DGCR6Q14129 220 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 HMBOX1Q6NT76 420 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 ADAM5Q6NVV9 412 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 NRMQ8IXM6 262 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 OR6X1Q8NH79 312 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 BCL2L2Q92843 193 aaPredicted RBP17.91■□□□□ 0.46
CCS-208ENST00000533244 ZNF837Q96EG3 531 aaPredicted RBP17.91■□□□□ 0.46
CCS-208ENST00000533244 ADAD1Q96M93 576 aaKnown RBP17.91■□□□□ 0.46
CCS-208ENST00000533244 OBP2BQ9NPH6 170 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 CCM2LQ9NUG4 571 aaPredicted RBP17.91■□□□□ 0.46
CCS-208ENST00000533244 PRPF19Q9UMS4 504 aaKnown RBP17.91■□□□□ 0.46
CCS-208ENST00000533244 HIF3AQ9Y2N7 669 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 RNF115Q9Y4L5 304 aa17.91■□□□□ 0.46
CCS-208ENST00000533244 A0A1W2PR80 420 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 BLOC1S5-TXNDC5H3BN57 136 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 SERPINI2O75830 405 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 CD3EP07766 207 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 MAKP20794 623 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 DNASE1P24855 282 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 BIDP55957 195 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 CAMK2DQ13557 499 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 ACKR1Q16570 336 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 TBRG1Q3YBR2 411 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 HIKESHIQ53FT3 197 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 MBOAT2Q6ZWT7 520 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 LILRB1Q8NHL6 650 aaPredicted RBP17.9■□□□□ 0.46
CCS-208ENST00000533244 SLC7A13Q8TCU3 470 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 MUC13Q9H3R2 512 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 CRLF2Q9HC73 371 aa17.9■□□□□ 0.46
CCS-208ENST00000533244 ARPC4-TTLL3A0A0A6YYG9 625 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 NPIPB13A6NJU9 1138 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 ZNF726A6NNF4 738 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 NPIPB4C9JG80 1138 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 hCG_2039718K7EN88 272 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 UBOX5O94941 541 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 H1F0P07305 194 aaKnown RBP17.89■□□□□ 0.46
CCS-208ENST00000533244 CDH2P19022 906 aaPredicted RBP17.89■□□□□ 0.46
CCS-208ENST00000533244 ATP6V1B2P21281 511 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 AQP2P41181 271 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms