RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 OR5L1Q8NGL2 311 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 CYP2W1Q8TAV3 490 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 GPR151Q8TDV0 419 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 TBCKQ8TEA7 893 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 SMPDL3BQ92485 455 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 TMEM186Q96B77 213 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 PYCR2Q96C36 320 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 PPP1R16AQ96I34 528 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 VAT1Q99536 393 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 HOPXQ9BPY8 73 aaPredicted RBP5.02□□□□□ -1.61
CD44-236ENST00000533222 SOSTQ9BQB4 213 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 TRMT61BQ9BVS5 477 aaKnown RBP5.02□□□□□ -1.61
CD44-236ENST00000533222 SNHG12Q9BXW3 62 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 WDR11Q9BZH6 1224 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 VCX2Q9H322 139 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 UBQLN3Q9H347 655 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 HRH4Q9H3N8 390 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 FBXO44Q9H4M3 255 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 METTL7AQ9H8H3 244 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 GALNT9Q9HCQ5 603 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 MYOZ2Q9NPC6 264 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 LHX9Q9NQ69 397 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 CUTCQ9NTM9 273 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 ABCB8Q9NUT2 735 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 BABAM1Q9NWV8 329 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 KLHL8Q9P2G9 620 aaPredicted RBP5.02□□□□□ -1.61
CD44-236ENST00000533222 SLC9A2Q9UBY0 812 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 ZNF629Q9UEG4 869 aaPredicted RBP5.02□□□□□ -1.61
CD44-236ENST00000533222 KCNG2Q9UJ96 466 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 FBXO4Q9UKT5 387 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 NDRG4Q9ULP0 352 aaKnown RBP5.02□□□□□ -1.61
CD44-236ENST00000533222 PLEKHM1Q9Y4G2 1056 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 ALG6Q9Y672 507 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 CDH10Q9Y6N8 788 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 TOPAZ1Q8N9V7 1692 aa5.02□□□□□ -1.61
CD44-236ENST00000533222 PTPRJQ12913 1337 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 DIP2BQ9P265 1576 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 FAM240BA0A1B0GVZ2 78 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 hCG_1809904A0A1W2PP81 198 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 A0A1W2PPE2 198 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 A0A1W2PR64 198 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 DHRS12A0PJE2 317 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 OR52A4PA6NMU1 304 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 AGAP14A8MT82 685 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 PRAMEF26H0Y7S4 382 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 TRAPPC2LH3BP13 241 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 KLRC4-KLRK1H3BQV0 150 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 GFYI3L273 518 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ZNF195O14628 629 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 CYB5BO43169 146 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 RNF13O43567 381 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 PRAMEF11O60813 436 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ICOSLGO75144 302 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 SLC25A27O95847 323 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 CYB5R3P00387 301 aaPredicted RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 MT-ND1P03886 318 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 SERPINE1P05121 402 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 INHBAP08476 426 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 IL6RP08887 468 aaPredicted RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 GIPP09681 153 aaPredicted RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 ETS1P14921 441 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ZNF14P17017 642 aaPredicted RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 GGT1P19440 569 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 SERPINA2P20848 420 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 BGNP21810 368 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 DRD5P21918 477 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ZBTB25P24278 435 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 IL12BP29460 328 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 COMPP49747 757 aaPredicted RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 NUDT2P50583 147 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ATP4BP51164 291 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 CTSCP53634 463 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 CTBP2P56545 445 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 LILRA4P59901 499 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ISL1P61371 349 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 HBA1P69905 142 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 PMPCAQ10713 525 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 TMEM115Q12893 351 aaPredicted RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 RAB35Q15286 201 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 RBBP7Q16576 425 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 FAM110CQ1W6H9 321 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 CEACAM21Q3KPI0 293 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 SPDYE7PQ495Y7 208 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 DUSP28Q4G0W2 176 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 EIPR1Q53HC9 387 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 TCTEX1D4Q5JR98 221 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 IDNKQ5T6J7 187 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 PRAMEF5Q5TYX0 476 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 DCAF12L1Q5VU92 463 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ZNF691Q5VV52 312 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 PRAMEF6Q5VXH4 476 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 RNLSQ5VYX0 342 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 IZUMO3Q5VZ72 239 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 KIAA0930Q6ICG6 404 aaPredicted RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 LINGO4Q6UY18 593 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 DEF8Q6ZN54 512 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 CDHR3Q6ZTQ4 885 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 FCRLAQ7L513 359 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ZNF627Q7L945 461 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 CBWD2Q8IUF1 395 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms