RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 HOXB1P14653 301 aaPredicted RBP26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 AHCYP23526 432 aa26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 ARF1P84077 181 aaKnown RBP26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 LRRC23Q53EV4 343 aaPredicted RBP26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 CYBRD1Q53TN4 286 aa26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 AGAP6Q5VW22 663 aa26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 B3GLCTQ6Y288 498 aa26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 TXNDC15Q96J42 360 aa26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 ELAC2Q9BQ52 826 aaKnown RBP26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 EMC6Q9BV81 110 aa26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 POLR2J2Q9GZM3 115 aaKnown RBP26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 POLR2J3Q9H1A7 115 aaKnown RBP26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 CRLF2Q9HC73 371 aa26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 HEATR1Q9H583 2144 aaKnown RBP26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 SLC35F4A4IF30 521 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 TRIM64A6NGJ6 449 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 TRIM64BA6NI03 449 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 H7C1Q1 480 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 KPNA4O00629 521 aaPredicted RBP26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 TTKP33981 857 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 CEACAM16Q2WEN9 425 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 CARD17Q5XLA6 110 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 DEF8Q6ZN54 512 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 TREML1Q86YW5 311 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 SLC15A3Q8IY34 581 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 C20orf196Q8IYI0 205 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 CIARTQ8N365 385 aaPredicted RBP26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 ZNF837Q96EG3 531 aaPredicted RBP26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 COX4I2Q96KJ9 171 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 LRR1Q96L50 414 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 SMR3AQ99954 134 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 NANSQ9NR45 359 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 ATP23Q9Y6H3 246 aa26.44■■□□□ 1.82
SSSCA1-207ENST00000533115 M0R3G1 203 aa26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 SHOX2O60902 331 aaPredicted RBP26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 OR6A2O95222 327 aa26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 OR1E2P47887 323 aa26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 SEC24CP53992 1094 aa26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 TAS2R41P59536 307 aa26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 PHYHD1Q5SRE7 291 aa26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 SLC38A2Q96QD8 506 aa26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 HOPXQ9BPY8 73 aaPredicted RBP26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 EFCAB1Q9HAE3 211 aa26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 ZNF229Q9UJW7 825 aa26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 ALPK2Q86TB3 2170 aa26.43■■□□□ 1.82
SSSCA1-207ENST00000533115 IGHV1-18A0A0C4DH31 117 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 ZNF726A6NNF4 738 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 C11orf98E9PRG8 122 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 SERPINI2O75830 405 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 OR5F1O95221 314 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 FABP6P51161 128 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 TUBA1BP68363 451 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 TUBA4AP68366 448 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 TUBA1AQ71U36 451 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 FBXL14Q8N1E6 418 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 MEPEQ9NQ76 525 aaPredicted RBP26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 CBLN4Q9NTU7 201 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 TAS2R5Q9NYW4 299 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 GMPR2Q9P2T1 348 aaKnown RBP26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 CRNNQ9UBG3 495 aaPredicted RBP26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 RIMS3Q9UJD0 308 aa26.42■■□□□ 1.82
SSSCA1-207ENST00000533115 ATP6V1G2-DDX39BF2Z307 99 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 SELENOWP63302 87 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 LIPEQ05469 1076 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 ZP4Q12836 540 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 PIN1Q13526 163 aaPredicted RBP26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 ZNF544Q6NX49 715 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 NKAIN4Q8IVV8 208 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 WDFY1Q8IWB7 410 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 MUC15Q8N387 334 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 LRRC17Q8N6Y2 441 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 TPD52L3Q96J77 140 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 MOV10Q9HCE1 1003 aaKnown RBP26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 B3GAT2Q9NPZ5 323 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 MOKQ9UQ07 419 aa26.41■■□□□ 1.82
SSSCA1-207ENST00000533115 ZNF99A8MXY4 864 aaPredicted RBP26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 HIST1H2ABP04908 130 aa26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 ASAH2BP0C7U1 165 aa26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 RBM34P42696 430 aaKnown RBP26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 CAMK2DQ13557 499 aa26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 ETFDHQ16134 617 aa26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 C3orf36Q3SXR2 165 aa26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 C11orf71Q6IPW1 123 aa26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 C8orf82Q6P1X6 216 aaPredicted RBP26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 HIST3H2AQ7L7L0 130 aa26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 HIST1H2ACQ93077 130 aa26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 MYLK2Q9H1R3 596 aa26.4■■□□□ 1.82
SSSCA1-207ENST00000533115 SMAD7O15105 426 aaKnown RBP26.39■■□□□ 1.82
SSSCA1-207ENST00000533115 UMPSP11172 480 aa26.39■■□□□ 1.82
SSSCA1-207ENST00000533115 IFNGR1P15260 489 aa26.39■■□□□ 1.82
SSSCA1-207ENST00000533115 SLC7A2P52569 658 aa26.39■■□□□ 1.82
SSSCA1-207ENST00000533115 HACD2Q6Y1H2 254 aa26.39■■□□□ 1.82
SSSCA1-207ENST00000533115 SLC46A3Q7Z3Q1 461 aa26.39■■□□□ 1.82
SSSCA1-207ENST00000533115 FAM169BQ8N8A8 192 aa26.39■■□□□ 1.82
SSSCA1-207ENST00000533115 OR6N1Q8NGY5 312 aa26.39■■□□□ 1.82
SSSCA1-207ENST00000533115 TMEM255BQ8WV15 326 aa26.39■■□□□ 1.82
SSSCA1-207ENST00000533115 KATNB1Q9BVA0 655 aa26.39■■□□□ 1.82
SSSCA1-207ENST00000533115 FAM107BQ9H098 131 aa26.39■■□□□ 1.82
SSSCA1-207ENST00000533115 NIPBLQ6KC79 2804 aaeCLIP26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 FAM171A2A8MVW0 826 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms