RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 IFITM2Q01629 132 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 ERV3-1Q14264 604 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 PLEKHS1Q5SXH7 462 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 REEP3Q6NUK4 255 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 TMEM150AQ86TG1 271 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 CCDC190Q86UF4 302 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 C19orf47Q8N9M1 422 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 OR8J3Q8NGG0 315 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 OR8J1Q8NGP2 316 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 OR13C9Q8NGT0 318 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 DYNC2LI1Q8TCX1 351 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 OSTF1Q92882 214 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 GLYATL1Q969I3 302 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 IL17FQ96PD4 163 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 GPR62Q9BZJ7 368 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 POMT2Q9UKY4 750 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 PAPPA2Q9BXP8 1791 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 LIPAP38571 399 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 AGTR2P50052 363 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 GP2P55259 537 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 CXCR4P61073 352 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 NSDHLQ15738 373 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 ZNF630Q2M218 657 aaPredicted RBP6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 TIFABQ6ZNK6 161 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 IGDCC3Q8IVU1 814 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 LINC00471Q8N535 108 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 DDA1Q9BW61 102 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 TNFRSF19Q9NS68 423 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 OR6C3Q9NZP0 311 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 NAV1Q8NEY1 1877 aa6.48□□□□□ -1.37
TGFBR3-210ENST00000533089 XRCC3O43542 346 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 LATO43561 262 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 LILRB3O75022 631 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 CA3P07451 260 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 FCER1GP30273 86 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 PYCR1P32322 319 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 PRSS3P35030 304 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 PCGF2P35227 344 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 DIO3P55073 304 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 INCA1Q0VD86 236 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 AQP6Q13520 282 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 RBMS2Q15434 407 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 RPE65Q16518 533 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 TAF9Q16594 264 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 LRRC56Q8IYG6 542 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 NUDT10Q8NFP7 164 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 OR13C3Q8NGS6 347 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 SLC7A13Q8TCU3 470 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 FOXJ2Q9P0K8 574 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 TEX264Q9Y6I9 313 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 CROCCQ5TZA2 2017 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 FTCDNL1E5RQL4 147 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 SLC16A5O15375 505 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 GPR37L1O60883 481 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 HEXAP06865 529 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 RNH1P13489 461 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 PRF1P14222 555 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 UQCRC2P22695 453 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 STC1P52823 247 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 RAB11AP62491 216 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 RCAN2Q14206 197 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 DEFB110Q30KQ9 67 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 SPANXN4Q5MJ08 99 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 TXNRD3NBQ6F5E7 133 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 CILP2Q8IUL8 1156 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 OR52P1PQ8NH57 321 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 SLC35F5Q8WV83 523 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 NUDT11Q96G61 164 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 C1orf74Q96LT6 269 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 GPR87Q9BY21 358 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 PCED1AQ9H1Q7 454 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 PDLIM7Q9NR12 457 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 KCNIP2Q9NS61 270 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 THSD1Q9NS62 852 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 EPHA6Q9UF33 1036 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 CHRNA9Q9UGM1 479 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 MYH2Q9UKX2 1941 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 LPLP06858 475 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 POU3F4P49335 361 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 PLP1P60201 277 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 SOX4Q06945 474 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 RUNX2Q13950 521 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 KCNC3Q14003 757 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.47□□□□□ -1.375e-11■■■■■ 42.7
TGFBR3-210ENST00000533089 ADGRG7Q96K78 797 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 ATF6BQ99941 703 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 DPH7Q9BTV6 452 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 MVB12BQ9H7P6 319 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 AJAP1Q9UKB5 411 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 KAT6AQ92794 2004 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 TRBV2A0A0J9YWF9 115 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 VSTM2BA6NLU5 285 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 RNASEK-C17orf49H0YIS7 233 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 EEDO75530 441 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 FOLR3P41439 243 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 SULT1A2P50226 295 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 TAS2R31P59538 309 aa6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 RPS15AP62244 130 aaKnown RBP6.47□□□□□ -1.37
TGFBR3-210ENST00000533089 DEFB133Q30KQ1 61 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms