RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 RDH5Q92781 318 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 BCL2L2Q92843 193 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-223ENST00000533079 COQ8BQ96D53 544 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 SPDL1Q96EA4 605 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 DNAJA3Q96EY1 480 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 SLC35G5Q96KT7 338 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 ZNF385AQ96PM9 386 aaKnown RBP10.72□□□□□ -0.69
CAPN1-223ENST00000533079 ALKBH3Q96Q83 286 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-223ENST00000533079 CDRT15Q96T59 188 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 ZNF416Q9BWM5 594 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 LINC00470Q9BZP3 86 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 NTN4Q9HB63 628 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 TMED7Q9Y3B3 224 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 CMAHPQ9Y471 501 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 WDR45Q9Y484 360 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 PCDHGB1Q9Y5G3 927 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 IGHV2OR16-5A0A0B4J2B6 119 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 A0A0G2JMP0 313 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 A0A0X1KG70 313 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 SH3PXD2BA1X283 911 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 MRASO14807 208 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 CFLARO15519 480 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 FKBP6O75344 327 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 BCL10O95999 233 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 IL6P05231 212 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 HKR1P10072 659 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 G6PDP11413 515 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 CBR1P16152 277 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 RYKP34925 604 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 IDH2P48735 452 aaKnown RBP10.71□□□□□ -0.69
CAPN1-223ENST00000533079 TMEM33P57088 247 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 UFM1P61960 85 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 UBA52P62987 128 aaKnown RBP10.71□□□□□ -0.69
CAPN1-223ENST00000533079 TRAP1Q12931 704 aaKnown RBP10.71□□□□□ -0.69
CAPN1-223ENST00000533079 SNTB2Q13425 540 aaKnown RBP10.71□□□□□ -0.69
CAPN1-223ENST00000533079 DAG1Q14118 895 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 MAPK14Q16539 360 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 ELFN2Q5R3F8 820 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 TYW3Q6IPR3 259 aaKnown RBP10.71□□□□□ -0.69
CAPN1-223ENST00000533079 FAHD2BQ6P2I3 314 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-223ENST00000533079 THSD4Q6ZMP0 1018 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 CCDC36Q8IYA8 594 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 BPIFB2Q8N4F0 458 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 OR4M2Q8NGB6 313 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 OR9I1Q8NGQ6 314 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 FAHD2AQ96GK7 314 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 ZBTB18Q99592 522 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 NELFAQ9H3P2 528 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 TPK1Q9H3S4 243 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 SERHL2Q9H4I8 314 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 HEATR1Q9H583 2144 aaKnown RBP10.71□□□□□ -0.69
CAPN1-223ENST00000533079 ZMAT3Q9HA38 289 aaKnown RBP10.71□□□□□ -0.69
CAPN1-223ENST00000533079 RNPEPL1Q9HAU8 725 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 LPAR2Q9HBW0 351 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 G6PC2Q9NQR9 355 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-223ENST00000533079 GIMAP2Q9UG22 337 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 LEF1Q9UJU2 399 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-223ENST00000533079 OSGIN1Q9UJX0 560 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 POMPQ9Y244 141 aa10.71□□□□□ -0.69
CAPN1-223ENST00000533079 TMEM72A0PK05 275 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 CCDC154A6NI56 674 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 LIPT2A6NK58 231 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 GSNP06396 782 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 PRPS1L1P21108 318 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 GATA3P23771 443 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 CLNS1AP54105 237 aaKnown RBP10.7□□□□□ -0.7
CAPN1-223ENST00000533079 RPS26P62854 115 aaKnown RBP10.7□□□□□ -0.7
CAPN1-223ENST00000533079 HBA1P69905 142 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 KCNJ10P78508 379 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 HPCAP84074 193 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 KPNB1Q14974 876 aaKnown RBP10.7□□□□□ -0.7
CAPN1-223ENST00000533079 OCLNQ16625 522 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 SAMD4BQ5PRF9 694 aaKnown RBP10.7□□□□□ -0.7
CAPN1-223ENST00000533079 MSANTD1Q6ZTZ1 278 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 C6orf120Q7Z4R8 191 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 GPAT4Q86UL3 456 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 RETREG3Q86VR2 466 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 TESCQ96BS2 214 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 CLPTM1LQ96KA5 538 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 TEX37Q96LM6 180 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 SEC61A2Q9H9S3 476 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 NOX3Q9HBY0 568 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 SPAG4Q9NPE6 437 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 DDX28Q9NUL7 540 aaKnown RBP10.7□□□□□ -0.7
CAPN1-223ENST00000533079 ABCD2Q9UBJ2 740 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 CD300AQ9UGN4 299 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 AP3M1Q9Y2T2 418 aa10.7□□□□□ -0.7
CAPN1-223ENST00000533079 LOC105371242A0A075B767 164 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 RNF103-CHMP3A0A140T963 221 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 LYNX1G3V0Z9 82 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 RPL36A-HNRNPH2H7BZ11 118 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 NR5A2O00482 541 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 ENTPD5O75356 428 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 BCAS1O75363 584 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-223ENST00000533079 LYNX1P0DP58 116 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 CCNA2P20248 432 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 TACR3P29371 465 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 IL12AP29459 219 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 SELENOPP49908 381 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms