RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 EMC6Q9BV81 110 aa12.74□□□□□ -0.37
CTSB-224ENST00000532392 UBTD1Q9HAC8 227 aa12.74□□□□□ -0.37
CTSB-224ENST00000532392 C20orf141Q9NUB4 165 aa12.74□□□□□ -0.37
CTSB-224ENST00000532392 MED29Q9NX70 200 aa12.74□□□□□ -0.37
CTSB-224ENST00000532392 NPAP1Q9NZP6 1156 aa12.74□□□□□ -0.37
CTSB-224ENST00000532392 RHCGQ9UBD6 479 aa12.74□□□□□ -0.37
CTSB-224ENST00000532392 MAGEL2Q9UJ55 1249 aa12.74□□□□□ -0.37
CTSB-224ENST00000532392 AMDHD2Q9Y303 409 aa12.74□□□□□ -0.37
CTSB-224ENST00000532392 RNF115Q9Y4L5 304 aa12.74□□□□□ -0.37
CTSB-224ENST00000532392 ROS1P08922 2347 aa12.74□□□□□ -0.37
CTSB-224ENST00000532392 ALPK2Q86TB3 2170 aa12.74□□□□□ -0.37
CTSB-224ENST00000532392 SLC35F4A4IF30 521 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 HTR3EA5X5Y0 456 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 ZNF726A6NNF4 738 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 RNF13O43567 381 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 SERPINI2O75830 405 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 HOXC12P31275 282 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 MSX2P35548 267 aaPredicted RBP12.73□□□□□ -0.37
CTSB-224ENST00000532392 ART1P52961 327 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 PRPS1P60891 318 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 BSPH1Q075Z2 132 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 TRAM2Q15035 370 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 CARD17Q5XLA6 110 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 NANOGNBQ7Z5D8 188 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 TSEN54Q7Z6J9 526 aaKnown RBP12.73□□□□□ -0.37
CTSB-224ENST00000532392 CYP4Z1Q86W10 505 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 RBM15BQ8NDT2 890 aaKnown RBP12.73□□□□□ -0.37
CTSB-224ENST00000532392 OR1K1Q8NGR3 316 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 BCAS4Q8TDM0 211 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 LIPHQ8WWY8 451 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 FOXC2Q99958 501 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 GPR35Q9HC97 309 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 MAN2C1Q9NTJ4 1040 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 ENPP4Q9Y6X5 453 aa12.73□□□□□ -0.37
CTSB-224ENST00000532392 BLOC1S5-TXNDC5H3BN57 136 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 HS3ST1O14792 307 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 CLOCKO15516 846 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 PRSS23O95084 383 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 WNT11O96014 354 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 IFNGR1P15260 489 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 FUT4P22083 530 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 CALB2P22676 271 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 ZNF83P51522 516 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 SH3BGRP55822 239 aaPredicted RBP12.72□□□□□ -0.37
CTSB-224ENST00000532392 DEFB113Q30KQ7 82 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 HIKESHIQ53FT3 197 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 ADAM5Q6NVV9 412 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 KLHL17Q6TDP4 642 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 KLHL24Q6TFL4 600 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 TMEM108Q6UXF1 575 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 C20orf204Q6ZNR8 217 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 SLC35D2Q76EJ3 337 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 C20orf196Q8IYI0 205 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 OR6X1Q8NH79 312 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 MAGEE2Q8TD90 523 aaPredicted RBP12.72□□□□□ -0.37
CTSB-224ENST00000532392 AKAP1Q92667 903 aaKnown RBP eCLIP12.72□□□□□ -0.37
CTSB-224ENST00000532392 BCL2L2Q92843 193 aaPredicted RBP12.72□□□□□ -0.37
CTSB-224ENST00000532392 C7orf34Q96L11 122 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 CXXC4Q9H2H0 198 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 CRLF2Q9HC73 371 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 OBP2BQ9NPH6 170 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 NDUFAF4Q9P032 175 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 FAM32AQ9Y421 112 aaKnown RBP12.72□□□□□ -0.37
CTSB-224ENST00000532392 MAGED1Q9Y5V3 778 aaPredicted RBP12.72□□□□□ -0.37
CTSB-224ENST00000532392 CADP27708 2225 aa12.72□□□□□ -0.37
CTSB-224ENST00000532392 M0R3G1 203 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 ARPC2O15144 300 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 PIP5K1CO60331 668 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 TSPAN19P0C672 248 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 T-ENOLP0DO92 83 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 IFI30P13284 250 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 HOXB1P14653 301 aaPredicted RBP12.71□□□□□ -0.37
CTSB-224ENST00000532392 PTAFRP25105 342 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 BIDP55957 195 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 LSM11P83369 360 aaKnown RBP eCLIP12.71□□□□□ -0.373e-6■□□□□ 9.5
CTSB-224ENST00000532392 ARF1P84077 181 aaKnown RBP12.71□□□□□ -0.37
CTSB-224ENST00000532392 CAMK2DQ13557 499 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 CEACAM16Q2WEN9 425 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 TBRG1Q3YBR2 411 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 PHYHD1Q5SRE7 291 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 ANKRD16Q6P6B7 361 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 SPNS3Q6ZMD2 512 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 WDFY1Q8IWB7 410 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 RNF113BQ8IZP6 322 aaKnown RBP12.71□□□□□ -0.37
CTSB-224ENST00000532392 FAM86B1Q8N7N1 296 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 ZNF611Q8N823 705 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 OR6N1Q8NGY5 312 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 LILRB1Q8NHL6 650 aaPredicted RBP12.71□□□□□ -0.37
CTSB-224ENST00000532392 ACOT11Q8WXI4 607 aaPredicted RBP12.71□□□□□ -0.37
CTSB-224ENST00000532392 PIGTQ969N2 578 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 BPIFA2Q96DR5 249 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 ZNF837Q96EG3 531 aaPredicted RBP12.71□□□□□ -0.37
CTSB-224ENST00000532392 PYURFQ96I23 114 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 ADAD1Q96M93 576 aaKnown RBP12.71□□□□□ -0.37
CTSB-224ENST00000532392 NSMCE2Q96MF7 247 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 ALPK1Q96QP1 1244 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 C1QTNF6Q9BXI9 259 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 ANKRD19PQ9H560 264 aa12.71□□□□□ -0.37
CTSB-224ENST00000532392 NMNAT1Q9HAN9 279 aaPredicted RBP12.71□□□□□ -0.37
CTSB-224ENST00000532392 B3GAT2Q9NPZ5 323 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms