RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 EPYCQ99645 322 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 ASPNQ9BXN1 380 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 PARD6BQ9BYG5 372 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 ULBP2Q9BZM5 246 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 SDR39U1Q9NRG7 319 aaPredicted RBP13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 KLHL14Q9P2G3 628 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 POFUT2Q9Y2G5 429 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 SPEF1Q9Y4P9 236 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 ANK2Q01484 3957 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.66□□□□□ -0.223e-9■□□□□ 9.7
CHMP4A-204ENST00000530996 LYNX1G3V0Z9 82 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 CLIC1O00299 241 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 TACSTD2P09758 323 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 LYNX1P0DP58 116 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 B4GALT1P15291 398 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 ITGA2P17301 1181 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 PCMT1P22061 227 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 HTR2AP28223 471 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 PRKAR1BP31321 381 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 LSP1P33241 339 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 PTDSS1P48651 473 aaKnown RBP13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 CDH15P55291 814 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 WDR4P57081 412 aaKnown RBP13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 RGS8P57771 180 aaPredicted RBP13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 MFSD13AQ14CX5 517 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 TRMT5Q32P41 509 aaKnown RBP13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 SHQ1Q6PI26 577 aaKnown RBP13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 GLCCI1Q86VQ1 547 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 SNX32Q86XE0 403 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 IL17RDQ8NFM7 739 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 OR6N1Q8NGY5 312 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 DNAJA4Q8WW22 397 aaPredicted RBP13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 MS4A3Q96HJ5 214 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 MAELQ96JY0 434 aaKnown RBP13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 OR52B2Q96RD2 323 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 DOK1Q99704 481 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 SYT3Q9BQG1 590 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 EMC6Q9BV81 110 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 SPATA5L1Q9BVQ7 753 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 C12orf10Q9HB07 376 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 BCL2L10Q9HD36 194 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 MED29Q9NX70 200 aa13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 TESQ9UGI8 421 aaKnown RBP13.66□□□□□ -0.22
CHMP4A-204ENST00000530996 IGKV1D-42A0A075B6H8 117 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 A0A1W2PPW3 197 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 SYNGR3O43761 229 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 LILRA1O75019 489 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 TCN1P20061 433 aaPredicted RBP13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 ALDH3B1P43353 468 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 RPS23P62266 143 aaKnown RBP13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 PIGFQ07326 219 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 PMS2P3Q13401 168 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 UGT2A3Q6UWM9 527 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 MAVSQ7Z434 540 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 ADPRHL1Q8NDY3 354 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 GTF2H4Q92759 462 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 MRPL24Q96A35 216 aaKnown RBP13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 C1orf159Q96HA4 380 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 MRPL37Q9BZE1 423 aaKnown RBP13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 PAIP1Q9H074 479 aaKnown RBP13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 LPAR2Q9HBW0 351 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 REV1Q9UBZ9 1251 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 CORINQ9Y5Q5 1042 aa13.65□□□□□ -0.22
CHMP4A-204ENST00000530996 NBEAL1Q6ZS30 2694 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 ARFGEF3Q5TH69 2177 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 A0A087WUJ7 227 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 HPRP00739 348 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 HLA-DOBP13765 273 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 ETS2P15036 469 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 NR4A1P22736 598 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 AHCYP23526 432 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 AQP1P29972 269 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 GPR6P46095 362 aaPredicted RBP13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 PUDPQ08623 228 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 CAMK2DQ13557 499 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 RIN1Q13671 783 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 MAD2L1BPQ15013 274 aaPredicted RBP13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 TNFAIP8L3Q5GJ75 292 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 PHYHD1Q5SRE7 291 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 ULK3Q6PHR2 472 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 NET1Q7Z628 596 aaPredicted RBP13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 C20orf196Q8IYI0 205 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 LSMEM1Q8N8F7 131 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 SLC47A1Q96FL8 570 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 TMEM27Q9HBJ8 222 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 FZR1Q9UM11 496 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 HEATR1Q9H583 2144 aaKnown RBP13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 MALRD1Q5VYJ5 2156 aa13.64□□□□□ -0.23
CHMP4A-204ENST00000530996 SVEP1Q4LDE5 3571 aa13.63□□□□□ -0.23
CHMP4A-204ENST00000530996 TMEM129A0AVI4 362 aa13.63□□□□□ -0.23
CHMP4A-204ENST00000530996 PRORSD1PA6NEY8 169 aa13.63□□□□□ -0.23
CHMP4A-204ENST00000530996 ZNF726A6NNF4 738 aa13.63□□□□□ -0.23
CHMP4A-204ENST00000530996 POLR3GO15318 223 aaPredicted RBP13.63□□□□□ -0.23
CHMP4A-204ENST00000530996 ARAFP10398 606 aa13.63□□□□□ -0.23
CHMP4A-204ENST00000530996 SAGP10523 405 aaPredicted RBP13.63□□□□□ -0.23
CHMP4A-204ENST00000530996 GIPRP48546 466 aa13.63□□□□□ -0.23
CHMP4A-204ENST00000530996 AQP5P55064 265 aa13.63□□□□□ -0.23
CHMP4A-204ENST00000530996 CDK6Q00534 326 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms