RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 GALEQ14376 348 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 DNM1P34Q6PK57 102 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 TSSK4Q6SA08 328 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 INO80EQ8NBZ0 244 aaPredicted RBP11.33□□□□□ -0.6
SCN3B-206ENST00000530277 RANBP3Q9H6Z4 567 aaPredicted RBP11.33□□□□□ -0.6
SCN3B-206ENST00000530277 HPF1Q9NWY4 346 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 SCML1Q9UN30 329 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 AKAP6Q13023 2319 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 TSPAN11A1L157 253 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 SYT7O43581 403 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 OR2T7P0C7T2 308 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 CDK5Q00535 292 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 HYAL1Q12794 435 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 DUSP8Q13202 625 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 SERTAD2Q14140 314 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 CDK10Q15131 360 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 TRAM1Q15629 374 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 TCTE1Q5JU00 501 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 KIAA0895LQ68EN5 471 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 ABHD12BQ7Z5M8 362 aaPredicted RBP11.33□□□□□ -0.6
SCN3B-206ENST00000530277 IQCF2Q8IXL9 164 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 BCORP1Q8N888 145 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 OR2T27Q8NH04 317 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 TMEM234Q8WY98 164 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 OR51B6Q9H340 312 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 ZNF576Q9H609 170 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 SCP2D1Q9UJQ7 156 aa11.33□□□□□ -0.6
SCN3B-206ENST00000530277 KANTRA0A1W2PQU2 76 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 H3BUI4 141 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 CTNSO60931 367 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 ZNF28P17035 718 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 SPI1P17947 270 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 HTR2AP28223 471 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 TNFRSF4P43489 277 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 CXADRP78310 365 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 EEF1A2Q05639 463 aaKnown RBP11.32□□□□□ -0.6
SCN3B-206ENST00000530277 GRK1Q15835 563 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 RAB12Q6IQ22 244 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 LCN10Q6JVE6 187 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 BRIX1Q8TDN6 353 aaKnown RBP11.32□□□□□ -0.6
SCN3B-206ENST00000530277 MRPL38Q96DV4 380 aaKnown RBP11.32□□□□□ -0.6
SCN3B-206ENST00000530277 SEMA6CQ9H3T2 930 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 MED29Q9NX70 200 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 IL20Q9NYY1 176 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 UPB1Q9UBR1 384 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 UBQLN2Q9UHD9 624 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 KLHL21Q9UJP4 597 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 MDC1Q14676 2089 aaKnown RBP11.32□□□□□ -0.6
SCN3B-206ENST00000530277 TEX13DA0A0J9YY54 714 aaPredicted RBP11.32□□□□□ -0.6
SCN3B-206ENST00000530277 AGPAT2O15120 278 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 SEMA7AO75326 666 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 RFPL3O75679 317 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 CSTBP04080 98 aaKnown RBP11.32□□□□□ -0.6
SCN3B-206ENST00000530277 CD14P08571 375 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 PEBP1P30086 187 aaKnown RBP11.32□□□□□ -0.6
SCN3B-206ENST00000530277 EMP2P54851 167 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 C1QL3Q5VWW1 255 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 SLC22A10Q63ZE4 541 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 AWAT2Q6E213 333 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 COMMD7Q86VX2 200 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 RNF113BQ8IZP6 322 aaKnown RBP11.32□□□□□ -0.6
SCN3B-206ENST00000530277 OR5T2Q8NGG2 359 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 ST6GALNAC5Q9BVH7 336 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 NT5DC2Q9H857 520 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 C2orf42Q9NWW7 574 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 A3GALT2U3KPV4 340 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 CACNA1DQ01668 2161 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 ZNF236Q9UL36 1845 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 OTX2P32243 289 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 GLO1Q04760 184 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 RPL22L1Q6P5R6 122 aaKnown RBP11.32□□□□□ -0.6
SCN3B-206ENST00000530277 LRRC18Q8N456 261 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 MORN4Q8NDC4 146 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 OR56B4Q8NH76 319 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 WDR34Q96EX3 536 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 ATF6BQ99941 703 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 TMEM43Q9BTV4 400 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 KCNK15Q9H427 330 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 PLEKHB1Q9UF11 243 aaPredicted RBP11.32□□□□□ -0.6
SCN3B-206ENST00000530277 KCNG2Q9UJ96 466 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 COPS3Q9UNS2 423 aa11.32□□□□□ -0.6
SCN3B-206ENST00000530277 TRBV11-1A0A0K0K1C0 115 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 OR14I1A6ND48 311 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 C4orf47A7E2U8 309 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 P2RY10O00398 339 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 ZNF749O43361 778 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 SUSD5O60279 629 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 CALCBP10092 127 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 ATF1P18846 271 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 DCTDP32321 178 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 MTNR1BP49286 362 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 KIAA1024LP59773 190 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.31□□□□□ -0.6
SCN3B-206ENST00000530277 GLYATL3Q5SZD4 288 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 LYPD8Q6UX82 237 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 THAP6Q8TBB0 222 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 CPNE2Q96FN4 548 aaPredicted RBP11.31□□□□□ -0.6
SCN3B-206ENST00000530277 C8orf33Q9H7E9 229 aaPredicted RBP11.31□□□□□ -0.6
SCN3B-206ENST00000530277 TREM1Q9NP99 234 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 NRIP3Q9NQ35 241 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms