RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 LRP5O75197 1615 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 A0A0B4J203 849 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 IGKV6-21A0A0C4DH24 114 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ANKRD61A6NGH8 418 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 THBS1P07996 1170 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ACHEP22303 614 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 BTG1P62324 171 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 POU3F1Q03052 451 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-223ENST00000529986 Q499Y3 187 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 KCTD11Q693B1 232 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 RBMS3Q6XE24 437 aaKnown RBP7.07□□□□□ -1.28
CTNND1-223ENST00000529986 MDGA2Q7Z553 956 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 SYT9Q86SS6 491 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 CDH26Q8IXH8 852 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 OR5M8Q8NGP6 311 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 RAB7BQ96AH8 199 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 NEURL2Q9BR09 285 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 TMEM59Q9BXS4 323 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 FAM234AQ9H0X4 552 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 OR10A5Q9H207 317 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 OR10A2Q9H208 303 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 SLCO5A1Q9H2Y9 848 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 PDLIM7Q9NR12 457 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 HIF1ANQ9NWT6 349 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 SLC35A3Q9Y2D2 325 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 CSAG2Q9Y5P2 127 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 CROCCQ5TZA2 2017 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 UMAD1C9J7I0 102 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 P2RY10O00398 339 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 PHF1O43189 567 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-223ENST00000529986 PMS2P2O95744 297 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 GABRB1P18505 474 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 CR2P20023 1033 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 NPBWR1P48145 328 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 KCNJ10P78508 379 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 HHEXQ03014 270 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 GLYATL3Q5SZD4 288 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 NXNL2Q5VZ03 156 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 TMEM184AQ6ZMB5 413 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 GRAMD2AQ8IUY3 354 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ATF6BQ99941 703 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 TPPP3Q9BW30 176 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ZNF286AQ9HBT8 521 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 CGGBP1Q9UFW8 167 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-223ENST00000529986 SLC23A2Q9UGH3 650 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 NENFQ9UMX5 172 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 A0A087WV62 115 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ZNF816-ZNF321PA0A0X1KG74 233 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ZNF724A8MTY0 619 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 SELENOFO60613 162 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 CBX7O95931 251 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 LGI1O95970 557 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 HBE1P02100 147 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 TK1P04183 234 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 TRAPPC2P0DI81 140 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 TRAPPC2BP0DI82 140 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 HLA-DOBP13765 273 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 PVRP15151 417 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 SRMP19623 302 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 SDHBP21912 280 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ELLP55199 621 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-223ENST00000529986 FOXK2Q01167 660 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 LTB4RQ15722 352 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 HENMT1Q5T8I9 393 aaKnown RBP7.07□□□□□ -1.28
CTNND1-223ENST00000529986 C9orf135Q5VTT2 229 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ETFRF1Q6IPR1 90 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 LINC00346Q8IVM7 164 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 NANOGP1Q8N7R0 232 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ZNF321PQ8N8H1 164 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 GCDHQ92947 438 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-223ENST00000529986 TMEM43Q9BTV4 400 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 SGPP1Q9BX95 441 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 PLK3Q9H4B4 646 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 CXorf36Q9H7Y0 433 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 SLC2A4RGQ9NR83 387 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 APOBEC3BQ9UH17 382 aaKnown RBP7.07□□□□□ -1.28
CTNND1-223ENST00000529986 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 FTCDNL1E5RQL4 147 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 PHOX2AO14813 284 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 CLDN1O95832 211 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 B3GALT4O96024 378 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ATXN1LP0C7T5 689 aaKnown RBP7.07□□□□□ -1.28
CTNND1-223ENST00000529986 NQO2P16083 231 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 TACR3P29371 465 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 HTR1FP30939 366 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 UBE2NP61088 152 aaKnown RBP7.07□□□□□ -1.28
CTNND1-223ENST00000529986 RPP30P78346 268 aaKnown RBP7.07□□□□□ -1.28
CTNND1-223ENST00000529986 CD300CQ08708 224 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 PDE7AQ13946 482 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 RNLSQ5VYX0 342 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 CNKSR3Q6P9H4 555 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 C1orf87Q8N0U7 546 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 OR2G3Q8NGZ4 309 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 OR8U1Q8NH10 309 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ARRDC2Q8TBH0 407 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 HAVCR2Q8TDQ0 301 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 ASB11Q8WXH4 323 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 FAM3DQ96BQ1 224 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 UHRF2Q96PU4 802 aa7.07□□□□□ -1.28
CTNND1-223ENST00000529986 SLC6A17Q9H1V8 727 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms