RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 DFNA5O60443 496 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 CST1P01037 141 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 CSTAP01040 98 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 TRBC1P01850 177 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 PLEKP08567 350 aaPredicted RBP3.24□□□□□ -1.89
C11orf88-204ENST00000529661 U2AF2P26368 475 aaKnown RBP eCLIP3.24□□□□□ -1.89
C11orf88-204ENST00000529661 CASP14P31944 242 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 FDFT1P37268 417 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 CRYBB2P43320 205 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 YWHAGP61981 247 aaKnown RBP eCLIP3.24□□□□□ -1.89
C11orf88-204ENST00000529661 LIPEQ05469 1076 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 ENPEPQ07075 957 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF763Q0D2J5 394 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 PPIL2Q13356 520 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 OR5I1Q13606 314 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 CHRNA6Q15825 494 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 MICBQ29980 383 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 AGBL2Q5U5Z8 902 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 TMEM107Q6UX40 140 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 SSX9Q7RTT3 188 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 TMEM179BQ7Z7N9 219 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 SCD5Q86SK9 330 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 NUDCD3Q8IVD9 361 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 RDH10Q8IZV5 341 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 SLC34A3Q8N130 599 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 C11orf42Q8N5U0 333 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 CSGALNACT2Q8N6G5 542 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 TPRX1Q8N7U7 411 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 OR1L6Q8NGR2 347 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF564Q8TBZ8 553 aaPredicted RBP3.24□□□□□ -1.89
C11orf88-204ENST00000529661 C7orf33Q8WU49 177 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 MITD1Q8WV92 249 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 ELMO1Q92556 727 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 FGF11Q92914 225 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 SLC38A4Q969I6 547 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.24□□□□□ -1.89
C11orf88-204ENST00000529661 TM4SF19Q96DZ7 209 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 NRBF2Q96F24 287 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 C16orf74Q96GX8 76 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 ZBED3Q96IU2 234 aaPredicted RBP3.24□□□□□ -1.89
C11orf88-204ENST00000529661 B3GALT6Q96L58 329 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 PRRC1Q96M27 445 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF641Q96N77 438 aaPredicted RBP3.24□□□□□ -1.89
C11orf88-204ENST00000529661 C20orf85Q9H1P6 137 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 BLZF1Q9H2G9 400 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 CYP3A43Q9HB55 503 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 SH2D2AQ9NP31 389 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 NT5MQ9NPB1 228 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 PDP1Q9P0J1 537 aaPredicted RBP3.24□□□□□ -1.89
C11orf88-204ENST00000529661 SLC7A8Q9UHI5 535 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 BTNL2Q9UIR0 455 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 PEX16Q9Y5Y5 336 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 GMEB1Q9Y692 573 aa3.24□□□□□ -1.89
C11orf88-204ENST00000529661 PRRC2AP48634 2157 aaKnown RBP3.24□□□□□ -1.89
C11orf88-204ENST00000529661 IGHV3OR16-13A0A075B7E8 117 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 TRBV11-1A0A0K0K1C0 115 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 LOC100506127A0A0U1RQW1 187 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 A6NIZ1 184 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 OR5B21A6NL26 309 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 GABRR3A8MPY1 467 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 HSBP1L1C9JCN9 74 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF701M0R085 212 aaPredicted RBP3.23□□□□□ -1.89
C11orf88-204ENST00000529661 HAT1O14929 419 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 CHMP2AO43633 222 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 SNAI1O95863 264 aaPredicted RBP3.23□□□□□ -1.89
C11orf88-204ENST00000529661 FTH1P02794 183 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 KLK3P07288 261 aaPredicted RBP3.23□□□□□ -1.89
C11orf88-204ENST00000529661 MCF2P10911 925 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 KITLGP21583 273 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 SHMT2P34897 504 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 VHLP40337 213 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 NAMPTP43490 491 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 GPM6AP51674 278 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 KPNA2P52292 529 aaKnown RBP3.23□□□□□ -1.89
C11orf88-204ENST00000529661 RAP1BP61224 184 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 CSNK1G2P78368 415 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 NDPQ00604 133 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 SCRN3Q0VDG4 424 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 GNMTQ14749 295 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 Q3ZCU0 254 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 HIKESHIQ53FT3 197 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 SAMD4BQ5PRF9 694 aaKnown RBP3.23□□□□□ -1.89
C11orf88-204ENST00000529661 C1orf146Q5VVC0 180 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 RSBN1Q5VWQ0 802 aaPredicted RBP3.23□□□□□ -1.89
C11orf88-204ENST00000529661 PLCXD3Q63HM9 321 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 EIF3MQ7L2H7 374 aaKnown RBP3.23□□□□□ -1.89
C11orf88-204ENST00000529661 SPATA24Q86W54 205 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF100Q8IYN0 542 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 MICU2Q8IYU8 434 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 Q8N7P7 452 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 NKAPP1Q8N9T2 125 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 OR4F6Q8NGB9 312 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 OR10G3Q8NGC4 313 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 TMIGD2Q96BF3 282 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 SGK3Q96BR1 496 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 CMTM7Q96FZ5 175 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 EBF4Q9BQW3 602 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 CENPKQ9BS16 269 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 ANKRD60Q9BZ19 345 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 RGCCQ9H4X1 137 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms