RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SLC46A3Q7Z3Q1 461 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 FGD2Q7Z6J4 655 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 DPPA2Q7Z7J5 298 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 CCDC36Q8IYA8 594 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 DEPDC4Q8N2C3 294 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 GPR137CQ8N3F9 429 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 CNEP1R1Q8N9A8 125 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 SETD9Q8NE22 299 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 OR51A7Q8NH64 312 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 MAGEE2Q8TD90 523 aaPredicted RBP7.07□□□□□ -1.28
SSBP3-211ENST00000528787 CA5BP1Q8WTZ4 195 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 TRUB1Q8WWH5 349 aaKnown RBP7.07□□□□□ -1.28
SSBP3-211ENST00000528787 MOGAT1Q96PD6 335 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 DMRTA2Q96SC8 542 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 CIB1Q99828 191 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 PKP2Q99959 881 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 APOL4Q9BPW4 351 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 SRXN1Q9BYN0 137 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 LINC00470Q9BZP3 86 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 OR10A4Q9H209 315 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 OR52D1Q9H346 318 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 Q9H521 79 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 SMURF2Q9HAU4 748 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 NTN4Q9HB63 628 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 PLSCR4Q9NRQ2 329 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 C20orf141Q9NUB4 165 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 TINAGQ9UJW2 476 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 SIGLEC7Q9Y286 467 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 FLVCR1Q9Y5Y0 555 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 MED12LQ86YW9 2145 aa7.07□□□□□ -1.28
SSBP3-211ENST00000528787 ZNF716A6NP11 495 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 ANKRD65E5RJM6 399 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 ZNF587BE7ETH6 402 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 C11orf98E9PRG8 122 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 KLF4O43474 513 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 PTP4A3O75365 173 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 FARS2O95363 451 aaKnown RBP7.06□□□□□ -1.28
SSBP3-211ENST00000528787 ATP6V1G2O95670 118 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 TXNDC12O95881 172 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 ALPLP05186 524 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 HOXB1P14653 301 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-211ENST00000528787 PPP3CBP16298 524 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 NPR2P20594 1047 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 MAKP20794 623 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 SHC1P29353 583 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 AGTR1P30556 359 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 GRK5P34947 590 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 CRISP1P54107 249 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 TPD52P55327 224 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-211ENST00000528787 CLDN17P56750 224 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 CLRN1P58418 232 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 PPP2R2BQ00005 443 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 SNCBQ16143 134 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 NRN1LQ496H8 165 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 C1QL3Q5VWW1 255 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 KDM4DQ6B0I6 523 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 HMBOX1Q6NT76 420 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 TSPYL5Q86VY4 417 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-211ENST00000528787 P2RY8Q86VZ1 359 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 CHERPQ8IWX8 916 aaKnown RBP7.06□□□□□ -1.28
SSBP3-211ENST00000528787 LNX2Q8N448 690 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 CBR4Q8N4T8 237 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 ARIH2OSQ8N7S6 290 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 OR9Q2Q8NGE9 314 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 OR13C2Q8NGS9 318 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 OR6N1Q8NGY5 312 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 ABHD3Q8WU67 409 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 NANOS1Q8WY41 292 aaKnown RBP7.06□□□□□ -1.28
SSBP3-211ENST00000528787 ROBO4Q8WZ75 1007 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 RFKQ969G6 155 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 GTPBP3Q969Y2 492 aaKnown RBP7.06□□□□□ -1.28
SSBP3-211ENST00000528787 Q96MT0 163 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 ZNF570Q96NI8 536 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 BBC3Q96PG8 261 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-211ENST00000528787 TNFRSF13CQ96RJ3 184 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 NPAS1Q99742 590 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 KLHDC3Q9BQ90 382 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 TSSK6Q9BXA6 273 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 GABARAPL3Q9BY60 117 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 ENKD1Q9H0I2 346 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 KCNN2Q9H2S1 579 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 SLCO5A1Q9H2Y9 848 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 FN3KQ9H479 309 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 KCNJ16Q9NPI9 418 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 NRIP3Q9NQ35 241 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 IMPAD1Q9NX62 359 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 SMPD3Q9NY59 655 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-211ENST00000528787 TAS2R5Q9NYW4 299 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 H2AFY2Q9P0M6 372 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-211ENST00000528787 FBXL3Q9UKT7 428 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 FAM215AQ9Y5M1 114 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 MAGED1Q9Y5V3 778 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-211ENST00000528787 MYO7BQ6PIF6 2116 aa7.06□□□□□ -1.28
SSBP3-211ENST00000528787 INTS1Q8N201 2190 aaKnown RBP7.05□□□□□ -1.28
SSBP3-211ENST00000528787 MED12Q93074 2177 aa7.05□□□□□ -1.28
SSBP3-211ENST00000528787 TRAV27A0A087WT01 109 aa7.05□□□□□ -1.28
SSBP3-211ENST00000528787 SAC3D1A6NKF1 404 aa7.05□□□□□ -1.28
SSBP3-211ENST00000528787 H0YAE9 185 aa7.05□□□□□ -1.28
SSBP3-211ENST00000528787 MS4A18H0YCH9 400 aa7.05□□□□□ -1.28
SSBP3-211ENST00000528787 CDC42EP2O14613 210 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms