RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 GDI2P50395 445 aaKnown RBP13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 BTBD16Q32M84 506 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 GLYR1Q49A26 553 aaPredicted RBP13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 TP53I3Q53FA7 332 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF684Q5T5D7 378 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 FAM69BQ5VUD6 431 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 AGAP7PQ5VUJ5 663 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 FAM198BQ6UWH4 519 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 UNQ9370/PRO34162Q6UXP9 181 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 H1FNTQ75WM6 255 aaPredicted RBP13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 SSX6Q7RTT6 188 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 CDC20BQ86Y33 519 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 LAX1Q8IWV1 398 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 TIGD4Q8IY51 512 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 SYT14Q8NB59 555 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 OR51L1Q8NGJ5 315 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 RPS4Y2Q8TD47 263 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 THAP3Q8WTV1 239 aaPredicted RBP13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 ASB17Q8WXJ9 295 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 THRSPQ92748 146 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 KLHDC3Q9BQ90 382 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 SRRQ9GZT4 340 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 PTGES2Q9H7Z7 377 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 WDR76Q9H967 626 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 SRA1Q9HD15 236 aaKnown RBP13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 GNG8Q9UK08 70 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 PTRH2Q9Y3E5 179 aaKnown RBP13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 B3GALT1Q9Y5Z6 326 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 V9GYH0 126 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 PCNX3Q9H6A9 2034 aa13.35□□□□□ -0.27
ECHDC1-220ENST00000528402 TRBV2A0A0J9YWF9 115 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 PRSS37A4D1T9 235 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 FTCDNL1E5RQL4 147 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 SEC14L5O43304 696 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 GMFGO60234 142 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 SELENOFO60613 162 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF354AO60765 605 aaPredicted RBP13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 OR2J2O76002 312 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF432O94892 652 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 DKK1O94907 266 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 KRT8P05787 483 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 CCL4P13236 92 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF28P17035 718 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 EDNRAP25101 427 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 FOLR3P41439 243 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 SCN1BQ07699 218 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 RIN1Q13671 783 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 ACKR1Q16570 336 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 YIF1BQ5BJH7 314 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 POMZP3Q6PJE2 187 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 DNM1P34Q6PK57 102 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 FAM131AQ6UXB0 335 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 PRR23CQ6ZRP0 262 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 OR6V1Q8N148 313 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 ZNF519Q8TB69 540 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 ZPLD1Q8TCW7 415 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 C8orf44Q96CB5 159 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 NXPE2Q96DL1 559 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 RASL10BQ96S79 203 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 INTS14Q96SY0 518 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 ARRDC1-AS1Q9H2J1 176 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 MIXL1Q9H2W2 232 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 MED11Q9P086 117 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 B3GALT5Q9Y2C3 310 aa13.34□□□□□ -0.27
ECHDC1-220ENST00000528402 A0A087WZY1 265 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNF879B4DU55 563 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 PDCD5O14737 125 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 LRRTM2O43300 516 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 KLF7O75840 302 aaPredicted RBP13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 RAB40ALP0C0E4 278 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 AHCYP23526 432 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 PTGDSP41222 190 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 CASP3P42574 277 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 EVX1P49640 407 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 DAP3P51398 398 aaKnown RBP13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 HCCSP53701 268 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 FOXL2P58012 376 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 ZMAT1Q5H9K5 638 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 C1QL3Q5VWW1 255 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 C16orf47Q6ZP98 133 aaPredicted RBP13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 NDUFAF7Q7L592 441 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 OR8H2Q8N162 312 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 ADPRHL1Q8NDY3 354 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 SLC25A43Q8WUT9 341 aaPredicted RBP13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNRF4Q8WWF5 429 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 FRMD6Q96NE9 622 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 UBL7Q96S82 380 aaPredicted RBP13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 DCLRE1CQ96SD1 692 aaKnown RBP13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 SDHCQ99643 169 aaPredicted RBP13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 SOSTQ9BQB4 213 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 FAM117AQ9C073 453 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 ZCCHC4Q9H5U6 513 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 RABL2AQ9UBK7 228 aaPredicted RBP13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 LAMP5Q9UJQ1 280 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 PADI1Q9ULC6 663 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 COPS3Q9UNS2 423 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 RABL2BQ9UNT1 228 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 B9D1Q9UPM9 204 aa13.33□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNF281Q9Y2X9 895 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms