RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ELOA3DA6NLF2 546 aaPredicted RBP9.62□□□□□ -0.87
NEDD8-204ENST00000526430 H0Y3Z8 333 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 SULT2B1O00204 365 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 PIP5K1CO60331 668 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 LMX1BO60663 402 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 GMNNO75496 209 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 SMNDC1O75940 238 aaKnown RBP eCLIP9.62□□□□□ -0.87
NEDD8-204ENST00000526430 PLAUP00749 431 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 THBDP07204 575 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 UMPSP11172 480 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 NQO1P15559 274 aaKnown RBP9.62□□□□□ -0.87
NEDD8-204ENST00000526430 FKBP2P26885 142 aaKnown RBP9.62□□□□□ -0.87
NEDD8-204ENST00000526430 GCKP35557 465 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 RPS5P46782 204 aaKnown RBP9.62□□□□□ -0.87
NEDD8-204ENST00000526430 EIF1AXP47813 144 aaKnown RBP9.62□□□□□ -0.87
NEDD8-204ENST00000526430 TAS2R41P59536 307 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 ACTR3P61158 418 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 ST3GAL3Q11203 375 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 DGCR6Q14129 220 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 PON3Q15166 354 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 ELOA3BQ3SY89 546 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 OR2A2Q6IF42 318 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 SLC46A3Q7Z3Q1 461 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 TMEM179BQ7Z7N9 219 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 ZDHHC21Q8IVQ6 265 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 CCDC103Q8IW40 242 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 WDFY1Q8IWB7 410 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 LRRC17Q8N6Y2 441 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 TMEM99Q8N816 258 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 ZIC4Q8N9L1 334 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 ELOA3Q8NG57 546 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 OR6S1Q8NH40 331 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 PFN4Q8NHR9 129 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 MFSD8Q8NHS3 518 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 LIPHQ8WWY8 451 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 AKAP1Q92667 903 aaKnown RBP eCLIP9.62□□□□□ -0.871e-17■□□□□ 10.9
NEDD8-204ENST00000526430 MPP4Q96JB8 637 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 GPA33Q99795 319 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 CHID1Q9BWS9 393 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 DENND2DQ9H6A0 471 aaPredicted RBP9.62□□□□□ -0.87
NEDD8-204ENST00000526430 NTN4Q9HB63 628 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 RPS6KB2Q9UBS0 482 aa9.62□□□□□ -0.87
NEDD8-204ENST00000526430 PRKDCP78527 4128 aaKnown RBP9.62□□□□□ -0.87
NEDD8-204ENST00000526430 IGHV4-30-2A0A087WSY4 118 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 IGHV3-15A0A0B4J1V0 119 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 DHRS12A0PJE2 317 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 ZNF716A6NP11 495 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 MS4A18H0YCH9 400 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 H3BNX3 289 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 AKR7A3O95154 331 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 HPRP00739 348 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 FABP3P05413 133 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 SOD3P08294 240 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 TSPAN19P0C672 248 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 RAP2AP10114 183 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 TFPIP10646 304 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 ZNF26P17031 533 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-204ENST00000526430 FUT1P19526 365 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 MAKP20794 623 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 IGFBP5P24593 272 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 EDNRAP25101 427 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 RBM34P42696 430 aaKnown RBP9.61□□□□□ -0.87
NEDD8-204ENST00000526430 KIR2DL2P43627 348 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-204ENST00000526430 PPP1R8Q12972 351 aaKnown RBP9.61□□□□□ -0.87
NEDD8-204ENST00000526430 MS4A18Q3C1V0 323 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 CYB5R2Q6BCY4 276 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 ZNF770Q6IQ21 691 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-204ENST00000526430 DEPDC4Q8N2C3 294 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 ARIH2OSQ8N7S6 290 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 OR10H5Q8NGA6 315 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 RNF128Q8TEB7 428 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 TMEM239Q8WW34 195 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 FBXW5Q969U6 566 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 DDIT4LQ96D03 193 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 B3GAT1Q9P2W7 334 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 ZNF175Q9Y473 711 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 LYVE1Q9Y5Y7 322 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 NBEAL2Q6ZNJ1 2754 aa9.61□□□□□ -0.87
NEDD8-204ENST00000526430 TRAV36DV7A0A075B6V5 113 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 SH3PXD2BA1X283 911 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 SLC22A20A6NK97 555 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 GJE1A6NN92 205 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 TCF21O43680 179 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 CYTIPO60759 359 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 FKBP6O75344 327 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 CGAP01215 116 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 IGF2P01344 180 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 GPIP06744 558 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 H1F0P07305 194 aaKnown RBP9.6□□□□□ -0.87
NEDD8-204ENST00000526430 ASAH2BP0C7U1 165 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 CD8BP10966 210 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 ZNF16P17020 682 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-204ENST00000526430 HNF1AP20823 631 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 CBLP22681 906 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 CDKN1AP38936 164 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 COMPP49747 757 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-204ENST00000526430 CTBP2P56545 445 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 OR2B6P58173 313 aa9.6□□□□□ -0.87
NEDD8-204ENST00000526430 RPS3AP61247 264 aaKnown RBP9.6□□□□□ -0.87
NEDD8-204ENST00000526430 PRKCDQ05655 676 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms