RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 HSPB2Q16082 182 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 RFX4Q33E94 735 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 ANKDD1AQ495B1 522 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 SLC36A3Q495N2 470 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 ALG10Q5BKT4 473 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 RIPPLY2Q5TAB7 128 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 TMEM225Q6GV28 225 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 SMARCD3Q6STE5 483 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 NHLRC1Q6VVB1 395 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 GPAT4Q86UL3 456 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 IGFN1Q86VF2 1251 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 SLC43A2Q8N370 569 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 PARP8Q8N3A8 854 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 PACRGLQ8N7B6 248 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 CLDN22Q8N7P3 220 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 C9orf106Q8NAJ2 232 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 WNT2BQ93097 391 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 OXGR1Q96P68 337 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 PLA2G12AQ9BZM1 189 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 FANCFQ9NPI8 374 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 KCNJ16Q9NPI9 418 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 IL20Q9NYY1 176 aa10.61□□□□□ -0.71
PVT1-215ENST00000522963 LOC102725191A0A1B0GVB3 256 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 C19orf84I3L1E1 186 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 DLGAP1O14490 977 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 SERPINI2O75830 405 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 VAMP5O95183 116 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 F13BP05160 661 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 TMIGD3P0DMS9 266 aaPredicted RBP10.6□□□□□ -0.71
PVT1-215ENST00000522963 FCGR2AP12318 317 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 POU1F1P28069 291 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 TIMP3P35625 211 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 POLR2IP36954 125 aaKnown RBP10.6□□□□□ -0.71
PVT1-215ENST00000522963 CRISP1P54107 249 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 CTXN1P60606 82 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 RASGEF1BQ0VAM2 473 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 PDK3Q15120 406 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 POU4F3Q15319 338 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 ZIK1Q3SY52 487 aaPredicted RBP10.6□□□□□ -0.71
PVT1-215ENST00000522963 ZNF787Q6DD87 383 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 PXKQ7Z7A4 578 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 LIX1LQ8IVB5 337 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 UEVLDQ8IX04 471 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 GCNT2Q8N0V5 402 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 ZIC4Q8N9L1 334 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 NAXEQ8NCW5 288 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 ANKK1Q8NFD2 765 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 OR9K2Q8NGE7 335 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 LILRB4Q8NHJ6 448 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 INTS12Q96CB8 462 aaKnown RBP10.6□□□□□ -0.71
PVT1-215ENST00000522963 GPX7Q96SL4 187 aaPredicted RBP10.6□□□□□ -0.71
PVT1-215ENST00000522963 SF3B5Q9BWJ5 86 aaKnown RBP10.6□□□□□ -0.71
PVT1-215ENST00000522963 TSSK6Q9BXA6 273 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 GABARAPL3Q9BY60 117 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 RIBC2Q9H4K1 309 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 RNF122Q9H9V4 155 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 C8orf4Q9NR00 106 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 INIPQ9NRY2 104 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 TBC1D23Q9NUY8 699 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 CLEC4AQ9UMR7 237 aa10.6□□□□□ -0.71
PVT1-215ENST00000522963 KLF2Q9Y5W3 355 aaPredicted RBP10.6□□□□□ -0.71
PVT1-215ENST00000522963 HCFC1P51610 2035 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 IGKV3D-15A0A087WSY6 115 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 MBD3L4A6NDZ8 208 aaPredicted RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 MBD3L3A6NE82 208 aaPredicted RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 MBD3L5A6NJ08 208 aaPredicted RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 H3BN98 237 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 DVL2O14641 736 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 TRAF3IP2O43734 574 aaPredicted RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 PPP1R3DO95685 299 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 SNAP29O95721 258 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 PLGP00747 810 aaPredicted RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 CD14P08571 375 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 ZNF43P17038 809 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 EPHA2P29317 976 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 SLC6A6P31641 620 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 CEACAM8P31997 349 aaPredicted RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 RPL4P36578 427 aaKnown RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 SLC16A1P53985 500 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 RAD23AP54725 363 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 ESRRGP62508 458 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 ERVK-25P63136 954 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 POU3F1Q03052 451 aaPredicted RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 NPRL3Q12980 569 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 C1DQ13901 141 aaKnown RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 RNPS1Q15287 305 aaKnown RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 SNCBQ16143 134 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 CLEC12AQ5QGZ9 265 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 RPL13AP3Q6NVV1 102 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 DPY19L2P2Q6ZN68 376 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 CREB3L2Q70SY1 520 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 WDFY1Q8IWB7 410 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 MCEMP1Q8IX19 187 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 IQCF1Q8N6M8 205 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 OR4Q3Q8NH05 313 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 MBD3L2Q8NHZ7 208 aaPredicted RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 TEX47Q8TBZ9 253 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 ZNF775Q96BV0 537 aaPredicted RBP10.59□□□□□ -0.71
PVT1-215ENST00000522963 TXNDC15Q96J42 360 aa10.59□□□□□ -0.71
PVT1-215ENST00000522963 ZNF385AQ96PM9 386 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms