RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 DEFB109BQ30KR1 87 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 GDF7Q7Z4P5 450 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 KIAA1958Q8N8K9 716 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 ARL11Q969Q4 196 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 OCSTAMPQ9BR26 566 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 PHIPQ8WWQ0 1821 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 ARPC5O15511 151 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 KCNK2O95069 426 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 SNCAP37840 140 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 PPICP45877 212 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 FOXC1Q12948 553 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 ZNF750Q32MQ0 723 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 SGK3Q96BR1 496 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 ELMOD3Q96FG2 381 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 IER2Q9BTL4 223 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 OR51J1Q9H342 316 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 LIN7BQ9HAP6 207 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 EHFQ9NZC4 300 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 OR51B4Q9Y5P0 310 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 CLDN24A6NM45 220 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 NRG2O14511 850 aaPredicted RBP14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 ADAM23O75077 832 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 ALPLP05186 524 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 GPX2P18283 190 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 ESPNLQ6ZVH7 1005 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 RETREG3Q86VR2 466 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 NRG4Q8WWG1 115 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 KCTD12Q96CX2 325 aaKnown RBP14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 LILRA5A6NI73 299 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 C4orf47A7E2U8 309 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 H7C1Q1 480 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 GPR85P60893 370 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 FOXK2Q01167 660 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 VWA2Q5GFL6 755 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 PGAP1Q75T13 922 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 ZNF808Q8N4W9 903 aaPredicted RBP14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 C19orf43Q9BQ61 176 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 SPTY2D1-AS1A0A0U1RR47 76 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 RFPL3O75679 317 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 B3GALT4O96024 378 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 MAKP20794 623 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 C21orf33P30042 268 aaPredicted RBP14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 EPHA5P54756 1037 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 IL13RA1P78552 427 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 FAM53BQ14153 422 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 CRMP1Q14194 572 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 HLA-BQ31612 363 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 CADM4Q8NFZ8 388 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 POC1BQ8TC44 478 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 LIPHQ8WWY8 451 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 ISL2Q96A47 359 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 ZC3HAV1LQ96H79 300 aaKnown RBP14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 CSF3RQ99062 836 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 TOGARAM1Q9Y4F4 1720 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 UBFD1O14562 309 aaKnown RBP14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 RGS11O94810 467 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 YRDCQ86U90 279 aaKnown RBP14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 CCDC74BQ96LY2 380 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 UBL7Q96S82 380 aaPredicted RBP14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 GCM1Q9NP62 436 aa14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 TIMM8BQ9Y5J9 83 aaPredicted RBP14.97□□□□□ -0.01
PCDHA3-201ENST00000522353 RRAS2P62070 204 aaPredicted RBP14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 RPS18P62269 152 aaKnown RBP14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 PIWIL3Q7Z3Z3 882 aaKnown RBP14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 ACBD4Q8NC06 268 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 DEDD2Q8WXF8 326 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 NDRG3Q9UGV2 375 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 GSTP1P09211 210 aaKnown RBP14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 SELENBP1Q13228 472 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 DUSP5Q16690 384 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 Q499Y3 187 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 AGBL4Q5VU57 503 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 OR6T1Q8NGN1 323 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 NKX3-1Q99801 234 aaPredicted RBP14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 DEFB127Q9H1M4 99 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 SELEP16581 610 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 HLA-DMAP28067 261 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 DLX5P56178 289 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 FGFBP1Q14512 234 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 TRMT12Q53H54 448 aaKnown RBP14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 ZNF836Q6ZNA1 936 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 H1FXQ92522 213 aaKnown RBP14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 SNX18Q96RF0 628 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 TAAR9Q96RI9 348 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 NOX4Q9NPH5 578 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 MUTYHQ9UIF7 546 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 KIF25Q9UIL4 384 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 PROCRQ9UNN8 238 aa14.96□□□□□ -0.01
PCDHA3-201ENST00000522353 BOLA2-SMG1P6H3BVE0 249 aa14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 OLFM2O95897 454 aa14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 NID1P14543 1247 aa14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 GABRG2P18507 467 aa14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 LUMP51884 338 aaPredicted RBP14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 PPIAP62937 165 aaKnown RBP14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 SLC35D3Q5M8T2 416 aa14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 TMEM106AQ96A25 262 aa14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 MIB2Q96AX9 1013 aa14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 SEMA4CQ9C0C4 833 aa14.96□□□□□ -0.02
PCDHA3-201ENST00000522353 SLC25A31Q9H0C2 315 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms