RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 TRAV27A0A087WT01 109 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 LRRC3CA6NJW4 275 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 A6NL46 340 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 ZNF891A8MT65 544 aaPredicted RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 A8MVM7 634 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 SLC1A7O00341 560 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 BHLHE40O14503 412 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 PRKYO43930 277 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 HCN1O60741 890 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 RCBTB2O95199 551 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 BGLAPP02818 100 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 P04436 131 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 TSPAN19P0C672 248 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 ASAH2BP0C7U1 165 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 SAGP10523 405 aaPredicted RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 CNR1P21554 472 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 CRHBPP24387 322 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 SLC9A3P48764 834 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 DNASE1L1P49184 302 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 PSMD7P51665 324 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 ZNF41P51814 821 aaPredicted RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 SMSP52788 366 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 CDH15P55291 814 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 TPD52P55327 224 aaPredicted RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 GABARAPL2P60520 117 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 CDC42P60953 191 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 CXCR4P61073 352 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 RPS4XP62701 263 aaKnown RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 OC90Q02509 493 aaPredicted RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 FOXO1Q12778 655 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 FOXF1Q12946 379 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 CLEC12AQ5QGZ9 265 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 SLC25A30Q5SVS4 291 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 ZNF362Q5T0B9 420 aaPredicted RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 SLC35F1Q5T1Q4 408 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 SLC27A4Q6P1M0 643 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 ZNF773Q6PK81 442 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 SMARCD3Q6STE5 483 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 LINC00696Q6ZRV3 163 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 PTCHD4Q6ZW05 846 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 OAFQ86UD1 273 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 FAM26EQ8N5C1 309 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 LRRC75AQ8NAA5 344 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 MDS2Q8NDY4 140 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 OR4K17Q8NGC6 315 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 OR5M1Q8NGP8 315 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 OR1J4Q8NGS1 313 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 OR51A7Q8NH64 312 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 RAB2BQ8WUD1 216 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 SGCDQ92629 289 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 ABTB1Q969K4 478 aaPredicted RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 ZNF566Q969W8 418 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 C1orf159Q96HA4 380 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 UTP23Q9BRU9 249 aaKnown RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 POLDIP3Q9BY77 421 aaKnown RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 OR11A1Q9GZK7 315 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 PAK1IP1Q9NWT1 392 aaPredicted RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 GPR83Q9NYM4 423 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 LRFN1Q9P244 771 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 IL20RAQ9UHF4 553 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 BLOC1S6Q9UL45 172 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 PAIP2BQ9ULR5 123 aaKnown RBP7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 POLHQ9Y253 713 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 VDAC3Q9Y277 283 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 ZNF337Q9Y3M9 751 aa7.06□□□□□ -1.28
CTHRC1-203ENST00000520337 PHF3Q92576 2039 aaKnown RBP7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 A0A087WZY1 265 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 FTCDNL1E5RQL4 147 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 H3BMQ9 156 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 SURF4O15260 269 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 KLK10O43240 276 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 ZNF208O43345 1280 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 XPNPEP2O43895 674 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 MPZL2O60487 215 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 MRPS14O60783 128 aaKnown RBP7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 FZD7O75084 574 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 CBR3O75828 277 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 CEACAM4O75871 244 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 HTR1AP08908 422 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 CCDC159P0C7I6 412 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 RFPL3SP0C7P2 107 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 DPP4P27487 766 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 RPS5P46782 204 aaKnown RBP7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 PCYT1AP49585 367 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 ENTPD1P49961 510 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 MAP2K6P52564 334 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 B3GALT5-AS1P59052 145 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 GTF3C1Q12789 2109 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 MFAP5Q13361 173 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 RAB39AQ14964 217 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 OR1C1Q15619 314 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 PGGHGQ32M88 737 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 GXYLT1Q4G148 440 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 PRR31Q5SQ13 230 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 AGAP7PQ5VUJ5 663 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 C1orf140Q5VVS0 124 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 STEAP3Q658P3 488 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 RPL13AP3Q6NVV1 102 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 CASP12Q6UXS9 341 aa7.05□□□□□ -1.28
CTHRC1-203ENST00000520337 SLC43A2Q8N370 569 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms