RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 IGLV3-22A0A075B6J6 115 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 OR2J3O76001 311 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 FOXN2P32314 431 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 NSG1P42857 185 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 NPBWR2P48146 333 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 CCNHP51946 323 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 APOC4P55056 127 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 GPX6P59796 221 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 RAB10P61026 200 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 GPNMBQ14956 572 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 CYTH1Q15438 398 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 Q6ZSR3 168 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 CEND1Q8N111 149 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 VN1R2Q8NFZ6 395 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 OR2G2Q8NGZ5 317 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 NEIL3Q8TAT5 605 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 STARD8Q92502 1023 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 UCN3Q969E3 161 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 CALYQ9NYX4 217 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 GCNT4Q9P109 453 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 PSME2Q9UL46 239 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 CDH10Q9Y6N8 788 aa3.81□□□□□ -1.8
HMGB1P46-201ENST00000520062 A0A0J9YXY3 114 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 C12orf71A8MTZ7 269 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 C12orf77C9JDV5 145 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 LSM1O15116 133 aaKnown RBP3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 MMP23AO75900 390 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 SLC2A5P22732 501 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 NAA10P41227 235 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 VDAC2P45880 294 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 ZNF239Q16600 458 aaKnown RBP3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 ALKBH6Q3KRA9 238 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 VAX1Q5SQQ9 334 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 GPR157Q5UAW9 335 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 C9orf135Q5VTT2 229 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 EIF3MQ7L2H7 374 aaKnown RBP3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 SSX9Q7RTT3 188 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 PEX26Q7Z412 305 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 LHFPL3Q86UP9 236 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 COMMD1Q8N668 190 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 OR9G1Q8NH87 305 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 CCDC126Q96EE4 140 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 OR51J1Q9H342 316 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 GPATCH2LQ9NWQ4 482 aa3.8□□□□□ -1.8
HMGB1P46-201ENST00000520062 TTC41PQ6P2S7 1318 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 PSMB11A5LHX3 300 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 RBMY1BA6NDE4 496 aaKnown RBP3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 RBMY1EA6NEQ0 496 aaKnown RBP3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 L7N2F9 121 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 RAB29O14966 203 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 TSPAN13O95857 204 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 RBMY1DP0C7P1 496 aaKnown RBP3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 RBMY1A1P0DJD3 496 aaKnown RBP3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 OR8G3PP0DMU2 310 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 RORAP35398 523 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 GPR6P46095 362 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 SSR4P51571 173 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 ACVR1Q04771 509 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 NSDHLQ15738 373 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 TMEM220Q6QAJ8 160 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 CLEC2AQ6UVW9 174 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 ZNF620Q6ZNG0 422 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 RFLNAQ6ZTI6 216 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 OFCC1Q8IZS5 231 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 ZNF740Q8NDX6 193 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 OR4A4PQ8NGN8 299 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 KIFAP3Q92845 792 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 MARC2Q969Z3 335 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 FCRL1Q96LA6 429 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 ATP5SQ99766 215 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 ROGDIQ9GZN7 287 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 DEFB127Q9H1M4 99 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 SIAEQ9HAT2 523 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 CRLF2Q9HC73 371 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 THSD7BQ9C0I4 1608 aa3.79□□□□□ -1.8
HMGB1P46-201ENST00000520062 PLEKHG1Q9ULL1 1385 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 GOLGA6L7A0A1B0GV03 622 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 NCF1BA6NI72 391 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 LRRIQ3A6PVS8 624 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 NCF1CA8MVU1 366 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 KRTAP4-16G5E9R7 235 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 AIM2O14862 343 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 MRPS12O15235 138 aaKnown RBP3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 HDAC3O15379 428 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 CHST1O43916 411 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 DNAJB6O75190 326 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 ICAM2P13598 275 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 FMO3P31513 532 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 RFX3P48380 749 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 TMED10P49755 219 aaKnown RBP3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 TIMM10P62072 90 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 PDIA2Q13087 525 aaKnown RBP3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 ORC2Q13416 577 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 CCDC14Q49A88 953 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 ZNF836Q6ZNA1 936 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 OTUD6AQ7L8S5 288 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 SLC16A14Q7RTX9 510 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 PRR22Q8IZ63 422 aa3.78□□□□□ -1.8
HMGB1P46-201ENST00000520062 PUSL1Q8N0Z8 303 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms