RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 MIER2Q8N344 545 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 SVOPLQ8N434 492 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 PAQR4Q8N4S7 273 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-213ENST00000519848 LRRC17Q8N6Y2 441 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 TRIML2Q8N7C3 387 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 LSMEM1Q8N8F7 131 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 BBS10Q8TAM1 723 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 STK35Q8TDR2 534 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 FAM168AQ92567 244 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 PMM1Q92871 262 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 SPDL1Q96EA4 605 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 C1orf159Q96HA4 380 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 C7orf26Q96N11 449 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 ZBTB18Q99592 522 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 NAA11Q9BSU3 229 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-213ENST00000519848 LINC00470Q9BZP3 86 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 PLK3Q9H4B4 646 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 CRLF2Q9HC73 371 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 TCF7L2Q9NQB0 619 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 GMEB1Q9Y692 573 aa7.46□□□□□ -1.22
PABPC1-213ENST00000519848 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.45□□□□□ -1.226e-17■■■■□ 19.3
PABPC1-213ENST00000519848 A0A087WUJ7 227 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 IGKV1D-43A0A0B4J1Z2 117 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 ZNF587BE7ETH6 402 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 M0R3G1 203 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 TLX2O43763 284 aaPredicted RBP7.45□□□□□ -1.22
PABPC1-213ENST00000519848 ERLIN1O75477 346 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 SASH3O75995 380 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 ANP32DO95626 131 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 OR4A8P0C604 315 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 B4GALT1P15291 398 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 ZNF14P17017 642 aaPredicted RBP7.45□□□□□ -1.22
PABPC1-213ENST00000519848 NCF2P19878 526 aaPredicted RBP7.45□□□□□ -1.22
PABPC1-213ENST00000519848 PRKAR1BP31321 381 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 APOBEC3AP31941 199 aaPredicted RBP7.45□□□□□ -1.22
PABPC1-213ENST00000519848 ERVS71-1P61550 626 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 CDK6Q00534 326 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 RUNX1T1Q06455 604 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 NPRL3Q12980 569 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 MELKQ14680 651 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 OR1Q1Q15612 314 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 GCNT6Q5T4J0 391 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 KLHL17Q6TDP4 642 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 CLEC2AQ6UVW9 174 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 SLC46A3Q7Z3Q1 461 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 HOMEZQ8IX15 550 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 C20orf196Q8IYI0 205 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 POMGNT2Q8NAT1 580 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 OR6T1Q8NGN1 323 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 SLC38A4Q969I6 547 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 TAMM41Q96BW9 452 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 TSPAN32Q96QS1 320 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 DOK1Q99704 481 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 ARHGDIGQ99819 225 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 PRSS27Q9BQR3 290 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 RHNO1Q9BSD3 238 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 KATNB1Q9BVA0 655 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 MRPL37Q9BZE1 423 aaKnown RBP7.45□□□□□ -1.22
PABPC1-213ENST00000519848 TPK1Q9H3S4 243 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 CHODLQ9H9P2 273 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 BARX1Q9HBU1 254 aaPredicted RBP7.45□□□□□ -1.22
PABPC1-213ENST00000519848 FZR1Q9UM11 496 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 MGAT4BQ9UQ53 548 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 RCE1Q9Y256 329 aa7.45□□□□□ -1.22
PABPC1-213ENST00000519848 RNF212BA8MTL3 300 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 SHOX2O60902 331 aaPredicted RBP7.44□□□□□ -1.22
PABPC1-213ENST00000519848 FAM157CP0CG43 387 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 ETS2P15036 469 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 FUT1P19526 365 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 USF1P22415 310 aaPredicted RBP7.44□□□□□ -1.22
PABPC1-213ENST00000519848 SEC24CP53992 1094 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 TXNL4AP83876 142 aaKnown RBP7.44□□□□□ -1.22
PABPC1-213ENST00000519848 POU3F1Q03052 451 aaPredicted RBP7.44□□□□□ -1.22
PABPC1-213ENST00000519848 SF3A3Q12874 501 aaKnown RBP eCLIP7.44□□□□□ -1.22
PABPC1-213ENST00000519848 SCARB2Q14108 478 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 MFSD13AQ14CX5 517 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 LARS2Q15031 903 aaKnown RBP7.44□□□□□ -1.22
PABPC1-213ENST00000519848 EFNB3Q15768 340 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 AGKQ53H12 422 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 RUNDC3AQ59EK9 446 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 SPRNQ5BIV9 151 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 ALG10BQ5I7T1 473 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 FAM69AQ5T7M9 428 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 AGBL2Q5U5Z8 902 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 TMEM225Q6GV28 225 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 KRT80Q6KB66 452 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 C8orf86Q6ZUL3 223 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 SPATA3Q8NHX4 192 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 MAGEE2Q8TD90 523 aaPredicted RBP7.44□□□□□ -1.22
PABPC1-213ENST00000519848 YIPF5Q969M3 257 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 ADAD1Q96M93 576 aaKnown RBP7.44□□□□□ -1.22
PABPC1-213ENST00000519848 OXGR1Q96P68 337 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 TAPBPLQ9BX59 468 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 MEPEQ9NQ76 525 aaPredicted RBP7.44□□□□□ -1.22
PABPC1-213ENST00000519848 FAIMQ9NVQ4 179 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 RASD1Q9Y272 281 aa7.44□□□□□ -1.22
PABPC1-213ENST00000519848 STAB1Q9NY15 2570 aa7.43□□□□□ -1.22
PABPC1-213ENST00000519848 TRAV36DV7A0A075B6V5 113 aa7.43□□□□□ -1.22
PABPC1-213ENST00000519848 SH3PXD2BA1X283 911 aa7.43□□□□□ -1.22
PABPC1-213ENST00000519848 CPSF4LA6NMK7 179 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms