RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CCDC6Q16204 474 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 PRTGQ2VWP7 1150 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 CARD16Q5EG05 197 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 FFAR4Q5NUL3 377 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 FAM120AOSQ5T036 256 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ARTNQ5T4W7 220 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 DUPD1Q68J44 220 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 FAHD1Q6P587 224 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 AHSA2Q719I0 299 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 PRELID2Q8N945 189 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF738Q8NE65 137 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 SEMA6DQ8NFY4 1073 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR9Q2Q8NGE9 314 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR5M1Q8NGP8 315 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR51F2Q8NH61 342 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR6X1Q8NH79 312 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR5K2Q8NHB8 316 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF502Q8TBZ5 544 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZPLD1Q8TCW7 415 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 PHF10Q8WUB8 498 aaKnown RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 PCNPQ8WW12 178 aaKnown RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 GTF3AQ92664 365 aaKnown RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 MRPS31Q92665 395 aaKnown RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 CPNE4Q96A23 557 aaPredicted RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 OTUB2Q96DC9 234 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 HSFY1Q96LI6 401 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 TOX2Q96NM4 488 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 SERPINB12Q96P63 405 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 MS4A4EQ96PG1 132 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ALKBH3Q96Q83 286 aaPredicted RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC38A3Q99624 504 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 FAM173AQ9BQD7 235 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 RSG1Q9BU20 258 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF426Q9BUY5 554 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ING2Q9H160 280 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 R3HDMLQ9H3Y0 253 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 NT5DC2Q9H857 520 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ELL3Q9HB65 397 aaPredicted RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 TMBIM4Q9HC24 238 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 MEPEQ9NQ76 525 aaPredicted RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 RMND1Q9NWS8 449 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 CLN6Q9NWW5 311 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 C1orf109Q9NX04 203 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 MAT2BQ9NZL9 334 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 WRAP73Q9P2S5 460 aaPredicted RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 KLK11Q9UBX7 282 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 KCNG2Q9UJ96 466 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 UBQLN1Q9UMX0 589 aaKnown RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 CFL2Q9Y281 166 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 TBL2Q9Y4P3 447 aaKnown RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 POLR3HQ9Y535 204 aaPredicted RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 CGNL1Q0VF96 1302 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 MROH7Q68CQ1 1323 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 IGLV5-37A0A075B6J1 123 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 A0A1B0GTI1 187 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 A0A1B0GW55 424 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 PSMB11A5LHX3 300 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 SAGE2PA6NJ88 616 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 CCL21O00585 134 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 TNFRSF13BO14836 293 aaPredicted RBP3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 SURF4O15260 269 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 PRKYO43930 277 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 SOX15O60248 233 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 CLDN11O75508 207 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 LYPD3O95274 346 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 SEC24AO95486 1093 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 LSM8O95777 96 aaKnown RBP3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 NGFP01138 241 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 IGHV4-39P01824 125 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 LGALS2P05162 132 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 GPIP06744 558 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 CD3GP09693 182 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 ACSM4P0C7M7 580 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 DUX4L2P0CJ85 424 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 DUX4L3P0CJ86 424 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 DUX4L4P0CJ87 422 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 DUX4L5P0CJ88 424 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 DUX4L6P0CJ89 424 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 DUX4L7P0CJ90 424 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 LIFP15018 202 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 SDC1P18827 310 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC2A5P22732 501 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 PSMB5P28074 263 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 DDOSTP39656 456 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 LEPP41159 167 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 TSFMP43897 325 aaKnown RBP3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 SERPINB8P50452 374 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 PRKXP51817 358 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 RAB14P61106 215 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 MAGOHP61326 146 aaKnown RBP3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC35B1P78383 322 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 FOXF2Q12947 444 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF154Q13106 437 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZBTB6Q15916 424 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 ECSCRQ19T08 205 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 COX19Q49B96 90 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 WDR25Q64LD2 544 aaPredicted RBP3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR52E8Q6IFG1 317 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 FAM199XQ6PEV8 388 aaPredicted RBP3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 DUX4L9Q6RFH8 374 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms