RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 EIF2B1Q14232 305 aaKnown RBP9.4□□□□□ -0.9
SMG7-215ENST00000515829 MFSD13AQ14CX5 517 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 RBMS2Q15434 407 aaKnown RBP9.4□□□□□ -0.9
SMG7-215ENST00000515829 LIPNQ5VXI9 398 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 TSSK4Q6SA08 328 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 OR1E3Q8WZA6 343 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 NKX3-1Q99801 234 aaPredicted RBP9.4□□□□□ -0.9
SMG7-215ENST00000515829 A0A0J9YY10 115 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 H3BUI4 141 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 M0QYG6 137 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 LGALS8O00214 317 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 SFTPBP07988 381 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 UBL4AP11441 157 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 HNRNPA2B1P22626 353 aaKnown RBP9.4□□□□□ -0.9
SMG7-215ENST00000515829 AGTR1P30556 359 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 PLP2Q04941 152 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 GPNMBQ14956 572 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 SLC6A19Q695T7 634 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 ZNF565Q8N9K5 539 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 OR4D9Q8NGE8 314 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 MAN2C1Q9NTJ4 1040 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 B4GALT7Q9UBV7 327 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 SERGEFQ9UGK8 458 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 WASF3Q9UPY6 502 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 ZNF806P0C7X5 589 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 S100A11P31949 105 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 NR0B1P51843 470 aaKnown RBP9.4□□□□□ -0.9
SMG7-215ENST00000515829 CXADRP78310 365 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 CDK5R1Q15078 307 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 TMEM225Q6GV28 225 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 LILRA6Q6PI73 481 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 ZSCAN4Q8NAM6 433 aaPredicted RBP9.4□□□□□ -0.9
SMG7-215ENST00000515829 PLPP7Q8NBV4 271 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 ACBD4Q8NC06 268 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 ATG2BQ96BY7 2078 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 MYOFQ9NZM1 2061 aa9.4□□□□□ -0.9
SMG7-215ENST00000515829 PRAMEF27A3QJZ7 478 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 IDSB3KWA1 339 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 ERVH48-1M5A8F1 160 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 SYNGR4O95473 234 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 DRD1P21728 446 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 DLSTP36957 453 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 BDH1Q02338 343 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 C1orf189Q5VU69 101 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 TMEM91Q6ZNR0 172 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 NLRC3Q7RTR2 1065 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 MCATQ8IVS2 390 aaKnown RBP9.4□□□□□ -0.91
SMG7-215ENST00000515829 OR51S1Q8NGJ8 323 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 PHOSPHO2Q8TCD6 241 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 FAM3CQ92520 227 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 SMIM19Q96E16 107 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 SDHAF2Q9NX18 166 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 ING1Q9UK53 422 aaPredicted RBP9.4□□□□□ -0.91
SMG7-215ENST00000515829 SEMA4FO95754 770 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 TPOP07202 933 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 PET100P0DJ07 73 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 SLC2A5P22732 501 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 SLC6A1P30531 599 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 VEGFBP49765 207 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 EMDP50402 254 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 MLC1Q15049 377 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 MLF2Q15773 248 aaPredicted RBP9.4□□□□□ -0.91
SMG7-215ENST00000515829 CARD17Q5XLA6 110 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 IDO2Q6ZQW0 420 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 NDUFAF7Q7L592 441 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 FRMD1Q8N878 549 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 STEAP2Q8NFT2 490 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 OR4N2Q8NGD1 307 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 SIGLEC11Q96RL6 698 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 DHRS9Q9BPW9 319 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 NAA11Q9BSU3 229 aaPredicted RBP9.4□□□□□ -0.91
SMG7-215ENST00000515829 ERVMER34-1Q9H9K5 563 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 PPP4R1LQ9P1A2 415 aa9.4□□□□□ -0.91
SMG7-215ENST00000515829 PCYT1BQ9Y5K3 369 aaPredicted RBP9.4□□□□□ -0.91
SMG7-215ENST00000515829 TRAPPC6AO75865 159 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 POU3F3P20264 500 aaPredicted RBP9.39□□□□□ -0.91
SMG7-215ENST00000515829 VASNQ6EMK4 673 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 USP53Q70EK8 1073 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 MR1Q95460 341 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 SLC25A44Q96H78 314 aaPredicted RBP9.39□□□□□ -0.91
SMG7-215ENST00000515829 PPP1R3EQ9H7J1 279 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 SCN3AQ9NY46 2000 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 TSPAN11A1L157 253 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 GABARAPH6UMI1 98 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 CEACAM5P06731 702 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 THBS1P07996 1170 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 JMJD7P0C870 316 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 TSFMP43897 325 aaKnown RBP9.39□□□□□ -0.91
SMG7-215ENST00000515829 MRPL49Q13405 166 aaKnown RBP9.39□□□□□ -0.91
SMG7-215ENST00000515829 FAM209AQ5JX71 171 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 MAMDC2Q7Z304 686 aaPredicted RBP9.39□□□□□ -0.91
SMG7-215ENST00000515829 ZNF283Q8N7M2 679 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 RNF170Q96K19 258 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 URM1Q9BTM9 101 aaKnown RBP9.39□□□□□ -0.91
SMG7-215ENST00000515829 DUSP22Q9NRW4 184 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 LRIT1Q9P2V4 623 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 SIRT4Q9Y6E7 314 aaPredicted RBP9.39□□□□□ -0.91
SMG7-215ENST00000515829 PIAS3Q9Y6X2 628 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 hCG_1807616A0A1W2PRN6 198 aa9.39□□□□□ -0.91
SMG7-215ENST00000515829 SERINC4A6NH21 518 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms