RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 C20orf196Q8IYI0 205 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 OR10H5Q8NGA6 315 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 OR6N1Q8NGY5 312 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 OR5J2Q8NH18 312 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 VANGL1Q8TAA9 524 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-215ENST00000515516 FAM168AQ92567 244 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 HIST1H2ACQ93077 130 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 SLC41A3Q96GZ6 507 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 LRR1Q96L50 414 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 ECSITQ9BQ95 431 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 EMC6Q9BV81 110 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 TMEM120AQ9BXJ8 343 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 CA10Q9NS85 328 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 CRNNQ9UBG3 495 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-215ENST00000515516 FBXO9Q9UK97 447 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-215ENST00000515516 USP22Q9UPT9 525 aa11.9□□□□□ -0.5
TCOF1-215ENST00000515516 PRR14LQ5THK1 2151 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 SLC35F4A4IF30 521 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 TRAPPC13A5PLN9 417 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 ZNF99A8MXY4 864 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-215ENST00000515516 B9A039 149 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 PLPP3O14495 311 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 CRLF1O75462 422 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 SERPINI2O75830 405 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 HPRP00739 348 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 OR4A8P0C604 315 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 ADORA3P0DMS8 318 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 CD247P20963 164 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 ARFIP2P53365 341 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 NPRL3Q12980 569 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 MAPRE2Q15555 327 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 SWI5Q1ZZU3 235 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 VMACQ2NL98 169 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 TRMT5Q32P41 509 aaKnown RBP11.89□□□□□ -0.51
TCOF1-215ENST00000515516 TMEM123Q8N131 208 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 ZNF525Q8N782 197 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 IL17RDQ8NFM7 739 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 OR6T1Q8NGN1 323 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 NANOS1Q8WY41 292 aaKnown RBP11.89□□□□□ -0.51
TCOF1-215ENST00000515516 PROX1Q92786 737 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 MOGAT1Q96PD6 335 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 VRK1Q99986 396 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-215ENST00000515516 WFDC6Q9BQY6 131 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 ULBP2Q9BZM5 246 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 SLC7A7Q9UM01 511 aa11.89□□□□□ -0.51
TCOF1-215ENST00000515516 C11orf98E9PRG8 122 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 PDE5AO76074 875 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 CH25HO95992 272 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 NPPAP01160 153 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 IFNA14P01570 189 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 IGKV3-15P01624 115 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 IGLV1-44P01699 117 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 ERCC1P07992 297 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-215ENST00000515516 CD79AP11912 226 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 HLA-DOBP13765 273 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 PDLIM4P50479 330 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 IDH3GP51553 393 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-215ENST00000515516 KRTAP1-1Q07627 177 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 CAMK2DQ13557 499 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 CARTPTQ16568 116 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 MST1LQ2TV78 715 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 NANOGP8Q6NSW7 305 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 ZNF813Q6ZN06 617 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 MDP1Q86V88 176 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 GPR32P1Q8NGA4 272 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 ADAMTS16Q8TE57 1224 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 ZNF837Q96EG3 531 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-215ENST00000515516 TXNDC15Q96J42 360 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 MPP4Q96JB8 637 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 TNFRSF13CQ96RJ3 184 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 NELFAQ9H3P2 528 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 NANOGQ9H9S0 305 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 NANSQ9NR45 359 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 MED29Q9NX70 200 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 HIVEP2P31629 2446 aa11.88□□□□□ -0.51
TCOF1-215ENST00000515516 BBIP1A8MTZ0 92 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 A8MV72 311 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-215ENST00000515516 LRRN3E7EW58 273 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 KPNA4O00629 521 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-215ENST00000515516 RNF13O43567 381 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 ENTPD5O75356 428 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 SASH3O75995 380 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 SEC14L2O76054 403 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 UMPSP11172 480 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 CALCRP30988 508 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 CSNK1A1P48729 337 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 LOXL1Q08397 574 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-215ENST00000515516 NPTX1Q15818 432 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 ADIPOQQ15848 244 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 COQ5Q5HYK3 327 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 PHYHD1Q5SRE7 291 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 ERICH5Q6P6B1 374 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 LINC00114Q6XXX2 140 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 CCDC80Q76M96 950 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 PRIMA1Q86XR5 153 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 RBM45Q8IUH3 476 aaKnown RBP11.87□□□□□ -0.51
TCOF1-215ENST00000515516 PCYOX1LQ8NBM8 494 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 NUP37Q8NFH4 326 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 OR8J3Q8NGG0 315 aa11.87□□□□□ -0.51
TCOF1-215ENST00000515516 C10orf105Q8TEF2 133 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms