RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 C10orf142B7Z368 130 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 D6RAR5 112 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 C11orf98E9PRG8 122 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 LGALS8O00214 317 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 POLR1CO15160 346 aaPredicted RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 ZSCAN12O43309 604 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 PDE5AO76074 875 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 SRP72O76094 671 aaKnown RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 OR6B1O95007 311 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 IGHG1P01857 330 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 FGGP02679 453 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 SLC35G4P0C7Q5 338 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 ATP1B2P14415 290 aaPredicted RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 GP9P14770 177 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 XRCC1P18887 633 aaPredicted RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 TEAD1P28347 426 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 HMGCLP35914 325 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 ETV5P41161 510 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 ARHGDIAP52565 204 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 MFAP2P55001 183 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 RAG2P55895 527 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 ERVPABLB-1P60509 514 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 BASP1P80723 227 aaKnown RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 SARNPP82979 210 aaKnown RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 EIF2B1Q14232 305 aaKnown RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 C16orf72Q14CZ0 275 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 ABRAXAS2Q15018 415 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 KCTD19Q17RG1 926 aaPredicted RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 ANKRD55Q3KP44 614 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 AGKQ53H12 422 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 VWA2Q5GFL6 755 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 ACER2Q5QJU3 275 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 GPRC6AQ5T6X5 926 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 HENMT1Q5T8I9 393 aaKnown RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 C9orf66Q5T8R8 295 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 ZNF343Q6P1L6 599 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 TIPARPQ7Z3E1 657 aaKnown RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 LINC00523Q86TU6 105 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 VASH2Q86V25 355 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 SERPINA9Q86WD7 417 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 SLC13A5Q86YT5 568 aaPredicted RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 LRRC8AQ8IWT6 810 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 Q8N377 158 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 C2orf73Q8N5S3 287 aaPredicted RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 OR52K1Q8NGK4 314 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 OR13C4Q8NGS5 318 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 GIPC3Q8TF64 312 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 MAIP1Q8WWC4 291 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 TAF15Q92804 592 aaKnown RBP eCLIP3.38□□□□□ -1.87
HTT-210ENST00000512909 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.38□□□□□ -1.87
HTT-210ENST00000512909 KIAA1143Q96AT1 154 aaPredicted RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 TMEM186Q96B77 213 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 COX14Q96I36 57 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 C12orf66Q96MD2 445 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 OLFM3Q96PB7 478 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 PPP1R2P1Q96PQ5 205 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 TRIB3Q96RU7 358 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 CCNL2Q96S94 520 aaPredicted RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 COPS8Q99627 209 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 NLNQ9BYT8 704 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 SIRPDQ9H106 197 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 GBA3Q9H227 469 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 LRRC40Q9H9A6 602 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 TIGARQ9NQ88 270 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 HRASLS2Q9NWW9 162 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 SOHLH2Q9NX45 425 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 IL17CQ9P0M4 197 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 TMEM9Q9P0T7 183 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 IKZF3Q9UKT9 509 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 MYO18AQ92614 2054 aaKnown RBP3.38□□□□□ -1.87
HTT-210ENST00000512909 CEP192Q8TEP8 1941 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 EP300Q09472 2414 aaPredicted RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 TMEM89A2RUT3 159 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 MGAT4DA6NG13 374 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 OR51F1A6NGY5 319 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 RPL37AP8A6NKH3 93 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 SRRM4A7MD48 611 aaKnown RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 GOLGA8MH3BSY2 632 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 K7EQG2 157 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 NVLO15381 856 aaKnown RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 ZNF189O75820 626 aaPredicted RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 SOD1P00441 154 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 KRT14P02533 472 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 PRB1P04280 392 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 HOXD4P09016 255 aaPredicted RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 OR56A5P0C7T3 313 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 UCP1P25874 307 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 MSNP26038 577 aaKnown RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 CA5AP35218 305 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 RPL22P35268 128 aaKnown RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 FDFT1P37268 417 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 ELK3P41970 407 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 GRIA1P42261 906 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 UCNP55089 124 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 CRADDP78560 199 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 ZFP36L1Q07352 338 aaKnown RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 CDH17Q12864 832 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 EIF3IQ13347 325 aaKnown RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 PPP1R7Q15435 360 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 SNAI3Q3KNW1 292 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms