RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 NXNQ6DKJ4 435 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 MSANTD1Q6ZTZ1 278 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 SLC46A3Q7Z3Q1 461 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 TMEM99Q8N816 258 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 ZIC4Q8N9L1 334 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 OR4F15Q8NGB8 312 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 OR1K1Q8NGR3 316 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 PNPT1Q8TCS8 783 aaKnown RBP6.26□□□□□ -1.41
USP46-208ENST00000512656 MAGEE2Q8TD90 523 aaPredicted RBP6.26□□□□□ -1.41
USP46-208ENST00000512656 HTRA1Q92743 480 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 SLC35B4Q969S0 331 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 FBXO17Q96EF6 278 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 TEX37Q96LM6 180 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 SLC38A2Q96QD8 506 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 PIMREGQ9BSJ6 248 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 KATNB1Q9BVA0 655 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 RAD21L1Q9H4I0 556 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 MANSC1Q9H8J5 431 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 PNPOQ9NVS9 261 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 THAP1Q9NVV9 213 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 ADPRHL2Q9NX46 363 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 MOKQ9UQ07 419 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 IFT52Q9Y366 437 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 GPR45Q9Y5Y3 372 aa6.26□□□□□ -1.41
USP46-208ENST00000512656 DSPPQ9NZW4 1301 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 ARPC4-TTLL3A0A0A6YYG9 625 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 LOC390937A0A1W2PQ73 354 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 KLF11O14901 512 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 PHF1O43189 567 aaPredicted RBP6.25□□□□□ -1.41
USP46-208ENST00000512656 FRS3O43559 492 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 LMX1BO60663 402 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 PDE5AO76074 875 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 BCHEP06276 602 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 GKN3PP0CG01 181 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 ZCCHC18P0CG32 403 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 IGHV4-31P0DP07 118 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 ZNF43P17038 809 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 EPHA3P29320 983 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 IL12AP29459 219 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 ACAA2P42765 397 aaKnown RBP6.25□□□□□ -1.41
USP46-208ENST00000512656 CDKN2CP42773 168 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 SLC25A3Q00325 362 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 GGTLC2Q14390 218 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 TBRG1Q3YBR2 411 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 PDCD4Q53EL6 469 aaKnown RBP6.25□□□□□ -1.41
USP46-208ENST00000512656 CEP85LQ5SZL2 805 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 PRAMEF8Q5VWM4 474 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 PRAMEF7Q5VXH5 474 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 FAM166AQ6J272 317 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 ANKRD16Q6P6B7 361 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 C5orf46Q6UWT4 87 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 ZNF836Q6ZNA1 936 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 CREB3L2Q70SY1 520 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 VRK2Q86Y07 508 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 PHC2Q8IXK0 858 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 CCDC36Q8IYA8 594 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 FAM169BQ8N8A8 192 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 MFSD8Q8NHS3 518 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 SLC38A5Q8WUX1 472 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 BCL2L2Q92843 193 aaPredicted RBP6.25□□□□□ -1.41
USP46-208ENST00000512656 ITCHQ96J02 903 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 ZNF385AQ96PM9 386 aaKnown RBP6.25□□□□□ -1.41
USP46-208ENST00000512656 SPATA9Q9BWV2 254 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 LINC00470Q9BZP3 86 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 RAB1BQ9H0U4 201 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 TPT1P8Q9HAU6 139 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 CA10Q9NS85 328 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 RLIMQ9NVW2 624 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 ZIM2Q9NZV7 527 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 RPS6KB2Q9UBS0 482 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 KCNS2Q9ULS6 477 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 RCE1Q9Y256 329 aa6.25□□□□□ -1.41
USP46-208ENST00000512656 ZNF443Q9Y2A4 671 aaPredicted RBP6.25□□□□□ -1.41
USP46-208ENST00000512656 IGHV1-18A0A0C4DH31 117 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 C5orf58C9J3I9 102 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 RPL36A-HNRNPH2H7BZ11 118 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 AIM2O14862 343 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 UBDO15205 165 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 AKAP8O43823 692 aaKnown RBP6.24□□□□□ -1.41
USP46-208ENST00000512656 OR2T1O43869 369 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 NPIPB7O75200 414 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 SNNO75324 88 aaPredicted RBP6.24□□□□□ -1.41
USP46-208ENST00000512656 SLC43A1O75387 559 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 LGI1O95970 557 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 C1QCP02747 245 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 KITP10721 976 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 APEHP13798 732 aaKnown RBP6.24□□□□□ -1.41
USP46-208ENST00000512656 ETFAP13804 333 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 SRD5A1P18405 259 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 VAMP1P23763 118 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 NR4A2P43354 598 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 SELENOPP49908 381 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 PPOXP50336 477 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 POLR2JP52435 117 aaKnown RBP6.24□□□□□ -1.41
USP46-208ENST00000512656 NAAAQ02083 359 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 BNIP2Q12982 314 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 FADDQ13158 208 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 C1DQ13901 141 aaKnown RBP6.24□□□□□ -1.41
USP46-208ENST00000512656 MFSD13AQ14CX5 517 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 EFNB3Q15768 340 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms