RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ERCC1P07992 297 aaPredicted RBP13.35□□□□□ -0.27
TPM3-219ENST00000509409 CD79AP11912 226 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 APEHP13798 732 aaKnown RBP13.35□□□□□ -0.27
TPM3-219ENST00000509409 AHCYP23526 432 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 THBS4P35443 961 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 HGFACQ04756 655 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 SPATA21Q7Z572 469 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 MDP1Q86V88 176 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 RANBP3LQ86VV4 465 aaPredicted RBP13.35□□□□□ -0.27
TPM3-219ENST00000509409 ZNF540Q8NDQ6 660 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 HIPK4Q8NE63 616 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 NUP37Q8NFH4 326 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 IL17RDQ8NFM7 739 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 ANKRD27Q96NW4 1050 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 PLK3Q9H4B4 646 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 TMEM38AQ9H6F2 299 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 CHODLQ9H9P2 273 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 MYOZ1Q9NP98 299 aaPredicted RBP13.35□□□□□ -0.27
TPM3-219ENST00000509409 TMEM160Q9NX00 188 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 FBXO9Q9UK97 447 aaPredicted RBP13.35□□□□□ -0.27
TPM3-219ENST00000509409 KCNS2Q9ULS6 477 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 USP22Q9UPT9 525 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 ANGPT4Q9Y264 503 aa13.35□□□□□ -0.27
TPM3-219ENST00000509409 IGHV2OR16-5A0A0B4J2B6 119 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 LOC102725191A0A1B0GVB3 256 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 SLC35F4A4IF30 521 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 ZNF99A8MXY4 864 aaPredicted RBP13.34□□□□□ -0.27
TPM3-219ENST00000509409 VWC2LB2RUY7 222 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 SERPINI2O75830 405 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 BGLAPP02818 100 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 HLA-DOBP13765 273 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 GPX2P18283 190 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 NPR2P20594 1047 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 ATP4BP51164 291 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 CDH12P55289 794 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 POU3F1Q03052 451 aaPredicted RBP13.34□□□□□ -0.27
TPM3-219ENST00000509409 DAG1Q14118 895 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 SQLEQ14534 574 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 EFNB3Q15768 340 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 PHYHD1Q5SRE7 291 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 FAM166AQ6J272 317 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 C20orf196Q8IYI0 205 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 SVOPLQ8N434 492 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 SMYD1Q8NB12 490 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 ADPRHL1Q8NDY3 354 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 OR6N1Q8NGY5 312 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 OR6S1Q8NH40 331 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 TXNDC15Q96J42 360 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 RABEP2Q9H5N1 569 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 IKZF5Q9H5V7 419 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 EVA1AQ9H8M9 152 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 SLC52A3Q9NQ40 469 aa13.34□□□□□ -0.27
TPM3-219ENST00000509409 A0A0B4J2E0 115 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 A0A1B0GX12 115 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 TRAF3IP2O43734 574 aaPredicted RBP13.33□□□□□ -0.28
TPM3-219ENST00000509409 FZD7O75084 574 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 OR6A2O95222 327 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 HPRP00739 348 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 PPOXP50336 477 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 PIGFQ07326 219 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 PUDPQ08623 228 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 CAMK2DQ13557 499 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 ADRM1Q16186 407 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 RUNDC3AQ59EK9 446 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 KRT80Q6KB66 452 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 ZNF813Q6ZN06 617 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 MYPOPQ86VE0 399 aaPredicted RBP13.33□□□□□ -0.28
TPM3-219ENST00000509409 SNX32Q86XE0 403 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 PHC2Q8IXK0 858 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 TMEM123Q8N131 208 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 ARIH2OSQ8N7S6 290 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 SCAIQ8N9R8 606 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 THOC1Q96FV9 657 aaKnown RBP13.33□□□□□ -0.28
TPM3-219ENST00000509409 LRR1Q96L50 414 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 ATP6V1G3Q96LB4 118 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 DOK1Q99704 481 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 MCHR1Q99705 422 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 WFDC6Q9BQY6 131 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 ZNF442Q9H7R0 627 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 DYNLRB1Q9NP97 96 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 MED29Q9NX70 200 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 LEF1Q9UJU2 399 aaPredicted RBP13.33□□□□□ -0.28
TPM3-219ENST00000509409 CMAHPQ9Y471 501 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 NOX1Q9Y5S8 564 aa13.33□□□□□ -0.28
TPM3-219ENST00000509409 TRBV5-3A0A0A0MS03 114 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 IGHV4-61A0A0C4DH41 118 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 ZNF503-AS2A6NEH8 195 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 LRRN3E7EW58 273 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 C11orf98E9PRG8 122 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 M0QX08 132 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 PHF1O43189 567 aaPredicted RBP13.32□□□□□ -0.28
TPM3-219ENST00000509409 TPST2O60704 377 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 MFN2O95140 757 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 STAMBPO95630 424 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 TGFAP01135 160 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 HLA-HP01893 362 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 DAOP14920 347 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 SNTB2Q13425 540 aaKnown RBP13.32□□□□□ -0.28
TPM3-219ENST00000509409 CYP51A1Q16850 503 aa13.32□□□□□ -0.28
TPM3-219ENST00000509409 DLEU7Q6UYE1 221 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms