RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 GTF2E2P29084 291 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 APOBEC1P41238 236 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 ASMTP46597 345 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 SLC6A9P48067 706 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 SH3BGRP55822 239 aaPredicted RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 KLF3P57682 345 aaPredicted RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 ARF1P84077 181 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 SRSF3P84103 164 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 C2orf80Q0P641 193 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 ILF2Q12905 390 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 MALLQ13021 153 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 GTF2H2Q13888 395 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 CD226Q15762 336 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 PGS1Q32NB8 556 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 RNASEH2BQ5TBB1 312 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 PRAMEF8Q5VWM4 474 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 PRAMEF7Q5VXH5 474 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 KANK2Q63ZY3 851 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 FRG2Q64ET8 278 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 TMEM225Q6GV28 225 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 SLC35E4Q6ICL7 350 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 GTF2H2CQ6P1K8 395 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 DRICH1Q6PGQ1 229 aaPredicted RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 C11orf88Q6PI97 169 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 CBLN3Q6UW01 205 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 UNQ9370/PRO34162Q6UXP9 181 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 MDP1Q86V88 176 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 CCDC170Q8IYT3 715 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 PRR18Q8N4B5 295 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 C1orf52Q8N6N3 182 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 CDRT4Q8N9R6 151 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 ZBTB34Q8NCN2 500 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 SDR9C7Q8NEX9 313 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 OR5AN1Q8NGI8 311 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 OR5W2Q8NH69 310 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 SVIPQ8NHG7 77 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 SYNPRQ8TBG9 265 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 MAGEE2Q8TD90 523 aaPredicted RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 NRG4Q8WWG1 115 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 IPCEF1Q8WWN9 437 aaPredicted RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 SELENOMQ8WWX9 145 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 RAB40AQ8WXH6 277 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 C11orf40Q8WZ69 217 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 CFHR4Q92496 578 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 UPRTQ96BW1 309 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 ELP4Q96EB1 424 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 THOC1Q96FV9 657 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 PLEKHA8Q96JA3 519 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 C3orf30Q96M34 536 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 FRG2BQ96QU4 278 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 ASCL2Q99929 193 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 PCGF1Q9BSM1 259 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 THUMPD3Q9BV44 507 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 ACTRT3Q9BYD9 372 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 SHCBP1LQ9BZQ2 653 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 TRIM15Q9C019 465 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 LAT2Q9GZY6 243 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 MMP28Q9H239 520 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 NOL11Q9H8H0 719 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 RNF121Q9H920 327 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 PATZ1Q9HBE1 687 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 NMRAL1Q9HBL8 299 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 MIEF1Q9NQG6 463 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 SIRT5Q9NXA8 310 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 GIN1Q9NXP7 522 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 NSMCE4AQ9NXX6 385 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 NKIRAS2Q9NYR9 191 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 GRHL1Q9NZI5 618 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 TMEM181Q9P2C4 612 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 MYEF2Q9P2K5 600 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 ZMAT5Q9UDW3 170 aaKnown RBP3.23□□□□□ -1.89
RNF4-211ENST00000509206 FOXJ3Q9UPW0 622 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 HDGFL3Q9Y3E1 203 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 NPTNQ9Y639 398 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 USH1CQ9Y6N9 552 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 STAB2Q8WWQ8 2551 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 DNAH1Q9P2D7 4330 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 DOCK11Q5JSL3 2073 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 PCLOQ9Y6V0 5065 aa3.23□□□□□ -1.89
RNF4-211ENST00000509206 COL7A1Q02388 2944 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 PLSCR5A0PG75 271 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 CCDC154A6NI56 674 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 ZNF264O43296 627 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 SPRY3O43610 288 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 PCDH7O60245 1069 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 EIF4E2O60573 245 aaKnown RBP3.22□□□□□ -1.89
RNF4-211ENST00000509206 MFAP3LO75121 409 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 TSPAN9O75954 239 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 KCNK2O95069 426 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 NKX2-2O95096 273 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 DUS4LO95620 317 aaKnown RBP3.22□□□□□ -1.89
RNF4-211ENST00000509206 CLIC3O95833 236 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 OR8G3PP0DMU2 310 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 BCKDHAP12694 445 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 STMN1P16949 149 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 TSPAN8P19075 237 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 MAKP20794 623 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 TYK2P29597 1187 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 ELK3P41970 407 aa3.22□□□□□ -1.89
RNF4-211ENST00000509206 ETV4P43268 484 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms