RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 ADORA3P0DMS8 318 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 UMPSP11172 480 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 CHRNB3Q05901 458 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 MS4A18Q3C1V0 323 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 CARD17Q5XLA6 110 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 LINC00114Q6XXX2 140 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 CARM1Q86X55 608 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 RBM45Q8IUH3 476 aaKnown RBP16.3■□□□□ 0.2
UBE3D-207ENST00000509102 OR6N1Q8NGY5 312 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 BCL2L2Q92843 193 aaPredicted RBP16.3■□□□□ 0.2
UBE3D-207ENST00000509102 LRR1Q96L50 414 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 SLC38A2Q96QD8 506 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 GPR35Q9HC97 309 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 ARMCX1Q9P291 453 aa16.3■□□□□ 0.2
UBE3D-207ENST00000509102 M0R3G1 203 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 KPNA4O00629 521 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-207ENST00000509102 PLPP3O14495 311 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 CH25HO95992 272 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 HEXAP06865 529 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 CAPZA2P47755 286 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 ARF1P84077 181 aaKnown RBP16.29■□□□□ 0.2
UBE3D-207ENST00000509102 LTBQ06643 244 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 CEACAM16Q2WEN9 425 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 C3orf36Q3SXR2 165 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 LRRC23Q53EV4 343 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-207ENST00000509102 DEF8Q6ZN54 512 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 LINGO2Q7L985 606 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 TMEM123Q8N131 208 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 LZICQ8WZA0 190 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 RCN3Q96D15 328 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 ZNF583Q96ND8 569 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 SMR3AQ99954 134 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 KATNB1Q9BVA0 655 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 ZNF229Q9UJW7 825 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 MOKQ9UQ07 419 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 VPS13CQ709C8 3753 aa16.29■□□□□ 0.2
UBE3D-207ENST00000509102 ZNF469Q96JG9 3925 aaPredicted RBP16.28■□□□□ 0.2
UBE3D-207ENST00000509102 ELOVL7A1L3X0 281 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 SLC35F4A4IF30 521 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 ZNF99A8MXY4 864 aaPredicted RBP16.28■□□□□ 0.2
UBE3D-207ENST00000509102 LRRN3E7EW58 273 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 C11orf98E9PRG8 122 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 ATP6V1G2-DDX39BF2Z307 99 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 RNF13O43567 381 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 HPRP00739 348 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 CD8AP01732 235 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 HLA-DOBP13765 273 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 APOBEC3AP31941 199 aaPredicted RBP16.28■□□□□ 0.2
UBE3D-207ENST00000509102 NUDT6P53370 316 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 RAB35Q15286 201 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 ZNF74Q16587 644 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 C20orf196Q8IYI0 205 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 MICU2Q8IYU8 434 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 CIARTQ8N365 385 aaPredicted RBP16.28■□□□□ 0.2
UBE3D-207ENST00000509102 POU5F2Q8N7G0 328 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 FAM169BQ8N8A8 192 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 OR4D11Q8NGI4 311 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 EMC6Q9BV81 110 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 CACNG6Q9BXT2 260 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 ULBP2Q9BZM5 246 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 MED29Q9NX70 200 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 POFUT2Q9Y2G5 429 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 PMF1-BGLAPU3KQ54 211 aa16.28■□□□□ 0.2
UBE3D-207ENST00000509102 NIPBLQ6KC79 2804 aaeCLIP16.27■□□□□ 0.2
UBE3D-207ENST00000509102 IGHV1-18A0A0C4DH31 117 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 VSTM5A8MXK1 200 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 NDUFAB1O14561 156 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 ENTPD5O75356 428 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 OR5F1O95221 314 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 COX4I1P13073 169 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 KDELR2P33947 212 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 ARR3P36575 388 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 RBM34P42696 430 aaKnown RBP16.27■□□□□ 0.2
UBE3D-207ENST00000509102 CSNK1A1P48729 337 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 CYBRD1Q53TN4 286 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 B3GLCTQ6Y288 498 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 WDR88Q6ZMY6 472 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 NANOGNBQ7Z5D8 188 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 NANOS1Q8WY41 292 aaKnown RBP16.27■□□□□ 0.2
UBE3D-207ENST00000509102 TPD52L3Q96J77 140 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 HOPXQ9BPY8 73 aaPredicted RBP16.27■□□□□ 0.2
UBE3D-207ENST00000509102 NSRP1Q9H0G5 558 aaKnown RBP16.27■□□□□ 0.2
UBE3D-207ENST00000509102 EFCAB1Q9HAE3 211 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 USP22Q9UPT9 525 aa16.27■□□□□ 0.2
UBE3D-207ENST00000509102 GSTA4O15217 222 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 IGHV4-39P01824 125 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 THRBP10828 461 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 IFNGR1P15260 489 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 ACVR1BP36896 505 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 CRYBA2P53672 197 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 TUBA1BP68363 451 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 TUBA4AP68366 448 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 TNK1Q13470 666 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 CAMK2DQ13557 499 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 Q71RC1 249 aaPredicted RBP16.26■□□□□ 0.19
UBE3D-207ENST00000509102 TUBA1AQ71U36 451 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 SPATA21Q7Z572 469 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 OR4F15Q8NGB8 312 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 TXNDC15Q96J42 360 aa16.26■□□□□ 0.19
UBE3D-207ENST00000509102 ZNF426Q9BUY5 554 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms