RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 CRLF2Q9HC73 371 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 CBLN4Q9NTU7 201 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 SH3GLB1Q9Y371 365 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 AKAP8O43823 692 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 FMO6PO60774 539 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 FZD7O75084 574 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 CH25HO95992 272 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 ADORA3P0DMS8 318 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 NUDT6P53370 316 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 PUDPQ08623 228 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 CAMK2DQ13557 499 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 MFSD13AQ14CX5 517 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 MAPRE2Q15555 327 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 ANKRD16Q6P6B7 361 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 TTC33Q6PID6 262 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 VHLLQ6RSH7 139 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 TMEM123Q8N131 208 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 ADPRHL1Q8NDY3 354 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 SLC41A3Q96GZ6 507 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 ADAD1Q96M93 576 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 SH3GL1Q99961 368 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 CORINQ9Y5Q5 1042 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 CAPN7Q9Y6W3 813 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 TLN2Q9Y4G6 2542 aa12.91□□□□□ -0.34
UBE2D3-228ENST00000508974 SLC35F4A4IF30 521 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 TRAPPC13A5PLN9 417 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 ZNF503-AS2A6NEH8 195 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 BBIP1A8MTZ0 92 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 PLPP3O14495 311 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 OR6A2O95222 327 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 LYPD3O95274 346 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 CELA3BP08861 270 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 UMPSP11172 480 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 NPRL3Q12980 569 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 ETFDHQ16134 617 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 LRRC23Q53EV4 343 aaPredicted RBP12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 DEF8Q6ZN54 512 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 MYPOPQ86VE0 399 aaPredicted RBP12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 CARM1Q86X55 608 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 CALHM3Q86XJ0 350 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 LRRC17Q8N6Y2 441 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 SCAIQ8N9R8 606 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 OR8J3Q8NGG0 315 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 OR5J2Q8NH18 312 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 OR6S1Q8NH40 331 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 C10orf82Q8WW14 230 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 PROX1Q92786 737 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 RCN3Q96D15 328 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 FBXO17Q96EF6 278 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 OBP2BQ9NPH6 170 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 MRPL39Q9NYK5 338 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 NOX1Q9Y5S8 564 aa12.9□□□□□ -0.34
UBE2D3-228ENST00000508974 ARPC4-TTLL3A0A0A6YYG9 625 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 ZNF726A6NNF4 738 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 INAFM1C9JVW0 142 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 RPL36A-HNRNPH2H7BZ11 118 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 LY6HO94772 140 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 CRYAAP02489 173 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 CECR9P0C854 216 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 CALCRP30988 508 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 OR1E2P47887 323 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 IDH3GP51553 393 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 SH3BGRP55822 239 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 BIDP55957 195 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 RAB35Q15286 201 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 COQ5Q5HYK3 327 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 ZNF544Q6NX49 715 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 LINC00114Q6XXX2 140 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 CCDC80Q76M96 950 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 PCYOX1LQ8NBM8 494 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 OR6N1Q8NGY5 312 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 RASSF5Q8WWW0 418 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 ZNF583Q96ND8 569 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 REG4Q9BYZ8 158 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 GRIP2Q9C0E4 1043 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 BARX1Q9HBU1 254 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 GID8Q9NWU2 228 aa12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 GMPR2Q9P2T1 348 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-228ENST00000508974 FN1P02751 2386 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 LOC102725191A0A1B0GVB3 256 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 ZNF99A8MXY4 864 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 RNF13O43567 381 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 MT-ATP6P00846 226 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 CD79AP11912 226 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 IFNGR1P15260 489 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 APOBEC3AP31941 199 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 MDH1P40925 334 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 TAS2R41P59536 307 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 NAAAQ02083 359 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 MELKQ14680 651 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 ZNF74Q16587 644 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 MDP1Q86V88 176 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 C20orf196Q8IYI0 205 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 ZNF525Q8N782 197 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 PFN4Q8NHR9 129 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 MAGEE2Q8TD90 523 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 BOD1Q96IK1 185 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 TPD52L3Q96J77 140 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 PRSS27Q9BQR3 290 aa12.88□□□□□ -0.35
UBE2D3-228ENST00000508974 ULBP2Q9BZM5 246 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms