RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 TEAD3Q99594 435 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 TMPRSS5Q9H3S3 457 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 DUX4Q9UBX2 424 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 SLC13A4Q9UKG4 626 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 SLC7A7Q9UM01 511 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 FOXJ3Q9UPW0 622 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 CORO2BQ9UQ03 480 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 LCTP09848 1927 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 EYSQ5T1H1 3165 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 TSC2P49815 1807 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 ANKRD20A5PA0PJZ0 165 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 MAN2B1O00754 1011 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 KIAA0355O15063 1070 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 OR1F1O43749 312 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 NME2P1O60361 137 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF821O75541 412 aaPredicted RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 THY1P04216 161 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 AMY2AP04746 511 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 KCNE1P15382 129 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 PPIBP23284 216 aaKnown RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 RPS27AP62979 156 aaKnown RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 UBA52P62987 128 aaKnown RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 MRPS10P82664 201 aaKnown RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF85Q03923 595 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 RASGEF1BQ0VAM2 473 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 TOMM20Q15388 145 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 PGGHGQ32M88 737 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF697Q5TEC3 545 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM220Q6QAJ8 160 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 FRRS1Q6ZNA5 592 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 MBOAT2Q6ZWT7 520 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 GALNT16Q8N428 558 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 POMGNT2Q8NAT1 580 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 OR6J1Q8NGC5 347 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 OR5AP2Q8NGF4 316 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 OR14K1Q8NGZ2 314 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 GRHL3Q8TE85 626 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 GJD4Q96KN9 370 aaPredicted RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 TSSK2Q96PF2 358 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 EIF5A2Q9GZV4 153 aaKnown RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM38AQ9H6F2 299 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 C6orf106Q9H6K1 298 aaPredicted RBP6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 DOK5Q9P104 306 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 RBPJLQ9UBG7 517 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 STEAP1Q9UHE8 339 aa6.65□□□□□ -1.34
LIMCH1-207ENST00000508466 HEATR5AQ86XA9 2040 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 DBX1A6NMT0 343 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 SLC38A8A6NNN8 435 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 KDM4EB2RXH2 506 aaPredicted RBP6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 GABARAPH6UMI1 98 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 ZNF208O43345 1280 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 TNFSF12O43508 249 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 PRAF2O60831 178 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 AQP8O94778 261 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 ZNF432O94892 652 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 POP4O95707 220 aaKnown RBP6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 AIFM1O95831 613 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 SOD3P08294 240 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 CKBP12277 381 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 HTR1FP30939 366 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 TLX1P31314 330 aaPredicted RBP6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 SLC6A12P48065 614 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 ASCL1P50553 236 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 PCBP4P57723 403 aaKnown RBP6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 SPCS3P61009 180 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 AMZ1Q400G9 498 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 NIPAL3Q6P499 406 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 MACC1Q6ZN28 852 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 TPGS1Q6ZTW0 290 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 BIVMQ86UB2 503 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 OR51A4Q8NGJ6 313 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 OR13C9Q8NGT0 318 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 EDEM2Q9BV94 578 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 SLC12A9Q9BXP2 914 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 TMPRSS13Q9BYE2 586 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 SEMA6CQ9H3T2 930 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 TUBA4BQ9H853 241 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 PARPBPQ9NWS1 579 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 CLEC4EQ9ULY5 219 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 FBXO7Q9Y3I1 522 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 CSAG2Q9Y5P2 127 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 ZNF236Q9UL36 1845 aa6.65□□□□□ -1.35
LIMCH1-207ENST00000508466 SPTBN5Q9NRC6 3674 aaKnown RBP6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 A0A1B0GWJ7 208 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 M0QZ92 97 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 M0QZQ0 153 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 BCL2L11O43521 198 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 RNH1P13489 461 aaKnown RBP6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 RPA2P15927 270 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 CR2P20023 1033 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 CD34P28906 385 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 ASMTP46597 345 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 OAZ1P54368 228 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 INPP5JQ15735 1006 aaPredicted RBP6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 C11orf87Q6NUJ2 197 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 ADCK2Q7Z695 626 aa6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 MAML2Q8IZL2 1156 aaPredicted RBP6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 RNF113BQ8IZP6 322 aaKnown RBP6.64□□□□□ -1.35
LIMCH1-207ENST00000508466 OR2T33Q8NG76 320 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms