RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 LYPD3O95274 346 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 IGLV1-44P01699 117 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 SH3BGRP55822 239 aaPredicted RBP12.42□□□□□ -0.42
RAB28-205ENST00000508274 NAAAQ02083 359 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 MFSD13AQ14CX5 517 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 MST1LQ2TV78 715 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 TRMT5Q32P41 509 aaKnown RBP12.42□□□□□ -0.42
RAB28-205ENST00000508274 RABL3Q5HYI8 236 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 SWT1Q5T5J6 900 aaKnown RBP12.42□□□□□ -0.42
RAB28-205ENST00000508274 METTL21CQ5VZV1 264 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 ZNF613Q6PF04 617 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 NHLRC1Q6VVB1 395 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 LINC00114Q6XXX2 140 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 C10orf53Q8N6V4 93 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 SCAIQ8N9R8 606 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 KCNS3Q9BQ31 491 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 RHNO1Q9BSD3 238 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 KATNB1Q9BVA0 655 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 ASPNQ9BXN1 380 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 FGFR1OP2Q9NVK5 253 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 ADAM21Q9UKJ8 722 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 USP22Q9UPT9 525 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 CORINQ9Y5Q5 1042 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 A0A096LNT2 108 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 SLC35F4A4IF30 521 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 C11orf98E9PRG8 122 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 AKAP8O43823 692 aaKnown RBP12.41□□□□□ -0.42
RAB28-205ENST00000508274 FMO6PO60774 539 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 IGKV3-15P01624 115 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 CRYAAP02489 173 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 C8BP07358 591 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 AHCYP23526 432 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 IDH3GP51553 393 aaPredicted RBP12.41□□□□□ -0.42
RAB28-205ENST00000508274 PUDPQ08623 228 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 PMS2P3Q13401 168 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 SWI5Q1ZZU3 235 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 VMACQ2NL98 169 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 NANOGP8Q6NSW7 305 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 VHLLQ6RSH7 139 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 PATL1Q86TB9 770 aaKnown RBP12.41□□□□□ -0.42
RAB28-205ENST00000508274 PIK3C3Q8NEB9 887 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 OR10H5Q8NGA6 315 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 ADAMTS16Q8TE57 1224 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 ZNF317Q96PQ6 595 aaPredicted RBP12.41□□□□□ -0.42
RAB28-205ENST00000508274 EVA1AQ9H8M9 152 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 NANOGQ9H9S0 305 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 CA10Q9NS85 328 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 ZNF446Q9NWS9 450 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 MRPL39Q9NYK5 338 aaKnown RBP12.41□□□□□ -0.42
RAB28-205ENST00000508274 SLC7A7Q9UM01 511 aa12.41□□□□□ -0.42
RAB28-205ENST00000508274 KIAA1324LA8MWY0 1029 aaPredicted RBP12.4□□□□□ -0.42
RAB28-205ENST00000508274 ZNF99A8MXY4 864 aaPredicted RBP12.4□□□□□ -0.42
RAB28-205ENST00000508274 KPNA4O00629 521 aaPredicted RBP12.4□□□□□ -0.42
RAB28-205ENST00000508274 PLPP3O14495 311 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 GPRIN2O60269 458 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 TNFRSF1BP20333 461 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 NPRL3Q12980 569 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 CAMK2DQ13557 499 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 REP15Q6BDI9 236 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 CLEC2AQ6UVW9 174 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 C20orf196Q8IYI0 205 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 ANKK1Q8NFD2 765 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 SLC26A7Q8TE54 656 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 NANOS1Q8WY41 292 aaKnown RBP12.4□□□□□ -0.42
RAB28-205ENST00000508274 LRRC58Q96CX6 371 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 NOX1Q9Y5S8 564 aa12.4□□□□□ -0.42
RAB28-205ENST00000508274 TROVE2P10155 538 aaKnown RBP eCLIP12.39□□□□□ -0.43
RAB28-205ENST00000508274 CAPZA2P47755 286 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 ARFIP2P53365 341 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 HGFACQ04756 655 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 CHRNB3Q05901 458 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 KLF10Q13118 480 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 ADIPOQQ15848 244 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 ZNF74Q16587 644 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 C3orf36Q3SXR2 165 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 INTS11Q5TA45 600 aaKnown RBP12.39□□□□□ -0.43
RAB28-205ENST00000508274 MDP1Q86V88 176 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 SLC30A8Q8IWU4 369 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 LRRC17Q8N6Y2 441 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 OR5J2Q8NH18 312 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 SORCS2Q96PQ0 1159 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 NOX3Q9HBY0 568 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 SAR1AQ9NR31 198 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 PMF1-BGLAPU3KQ54 211 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 MRASO14807 208 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 CD5LO43866 347 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 CH25HO95992 272 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 MT-ATP6P00846 226 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 HLA-HP01893 362 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 TP53P04637 393 aaPredicted RBP12.39□□□□□ -0.43
RAB28-205ENST00000508274 ADORA3P0DMS8 318 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 IFNGR1P15260 489 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 CBR1P16152 277 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 SERPINF1P36955 418 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 EFNA4P52798 201 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 CYLC2Q14093 348 aaPredicted RBP12.39□□□□□ -0.43
RAB28-205ENST00000508274 MMEL1Q495T6 779 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 TTC33Q6PID6 262 aaPredicted RBP12.39□□□□□ -0.43
RAB28-205ENST00000508274 CCDC80Q76M96 950 aa12.39□□□□□ -0.43
RAB28-205ENST00000508274 PXKQ7Z7A4 578 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms