RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TMCC3Q9ULS5 477 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 PDE10AQ9Y233 779 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 MAB21L2Q9Y586 359 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 BPTFQ12830 3046 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 ZFYVE26Q68DK2 2539 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 SHROOM3Q8TF72 1996 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 GCN1Q92616 2671 aaKnown RBP4.32□□□□□ -1.72
HERC4-213ENST00000506515 SMIM28A0A1B0GU29 152 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 E7EWF7 191 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 SPECC1L-ADORA2AF8WAN1 911 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 G3V4G9 280 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 TRDMT1O14717 391 aaKnown RBP4.32□□□□□ -1.72
HERC4-213ENST00000506515 MSH4O15457 936 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 RRP8O43159 456 aaKnown RBP4.32□□□□□ -1.72
HERC4-213ENST00000506515 LRATO95237 230 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 P0C879 139 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 GCKP35557 465 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 TUFMP49411 452 aaKnown RBP4.32□□□□□ -1.72
HERC4-213ENST00000506515 AP3M2P53677 418 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 LAMTOR4Q0VGL1 99 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 PRR4Q16378 134 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 UBE2SQ16763 222 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 FAM78AQ5JUQ0 283 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 ATAD3BQ5T9A4 648 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 ATF7IP2Q5U623 682 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 FAM199XQ6PEV8 388 aaPredicted RBP4.32□□□□□ -1.72
HERC4-213ENST00000506515 FRA10AC1Q70Z53 315 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 TRPM8Q7Z2W7 1104 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 ZNF584Q8IVC4 421 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 UBQLNLQ8IYU4 475 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 MTURNQ8N3F0 131 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 CLDN19Q8N6F1 224 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 OR2A12Q8NGT7 310 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 OMDQ99983 421 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 P2RY13Q9BPV8 354 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 Q9H3A6 140 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 FANCFQ9NPI8 374 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 NANSQ9NR45 359 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 MARCH5Q9NX47 278 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 TP53TG3Q9ULZ0 132 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 MRPS33Q9Y291 106 aaKnown RBP4.32□□□□□ -1.72
HERC4-213ENST00000506515 LAMA4Q16363 1823 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 SPEGQ15772 3267 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 LAMA5O15230 3695 aa4.32□□□□□ -1.72
HERC4-213ENST00000506515 DOCK6Q96HP0 2047 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 IGLV3-22A0A075B6J6 115 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 B4DXG7 233 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 TPST2O60704 377 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 STSP08842 583 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 ALOX5P09917 674 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 OR8U8P0C7N1 319 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 GCFC2P16383 781 aaKnown RBP4.31□□□□□ -1.72
HERC4-213ENST00000506515 HNF1AP20823 631 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 ZP3P21754 424 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 OTX2P32243 289 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 PRPHP41219 470 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 EFNA3P52797 238 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 PDGFRLQ15198 375 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 RNF212Q495C1 297 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 C10orf120Q5SQS8 335 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 METTL11BQ5VVY1 283 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 TTC23Q5W5X9 447 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 FAM71F2Q6NXP2 309 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 C11orf42Q8N5U0 333 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 ARL6IP6Q8N6S5 226 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 KIR3DL3Q8N743 410 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 OR2T3Q8NH03 318 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 SH3YL1Q96HL8 342 aaPredicted RBP4.31□□□□□ -1.72
HERC4-213ENST00000506515 AMDHD1Q96NU7 426 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 GLIPR2Q9H4G4 154 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 LCMT1Q9UIC8 334 aa4.31□□□□□ -1.72
HERC4-213ENST00000506515 ASCC3Q8N3C0 2202 aaKnown RBP4.31□□□□□ -1.72
HERC4-213ENST00000506515 TP53BP1Q12888 1972 aaPredicted RBP4.31□□□□□ -1.72
HERC4-213ENST00000506515 AGRNO00468 2067 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 FREM2Q5SZK8 3169 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 SPTA1P02549 2419 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 NUP205Q92621 2012 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 PP2D1A8MPX8 630 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 J3QKU1 62 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 KIF2AO00139 706 aaPredicted RBP4.3□□□□□ -1.72
HERC4-213ENST00000506515 SULT2B1O00204 365 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 HAT1O14929 419 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 MAGEB3O15480 346 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 SERF1AO75920 110 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 ZBTB25P24278 435 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 YWHABP31946 246 aaKnown RBP4.3□□□□□ -1.72
HERC4-213ENST00000506515 PPT1P50897 306 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 KYAT1Q16773 422 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 OR2B11Q5JQS5 317 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 CFAP157Q5JU67 520 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 LIPNQ5VXI9 398 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 TSTD1Q8NFU3 115 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 OR10A7Q8NGE5 316 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 C2orf15Q8WU43 125 aaKnown RBP4.3□□□□□ -1.72
HERC4-213ENST00000506515 TXN2Q99757 166 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 ZSCAN5AQ9BUG6 496 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 CCDC94Q9BW85 323 aaPredicted RBP4.3□□□□□ -1.72
HERC4-213ENST00000506515 PLA2G2FQ9BZM2 168 aa4.3□□□□□ -1.72
HERC4-213ENST00000506515 CHIAQ9BZP6 476 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms