RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 PMS2P2O95744 297 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 THY1P04216 161 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 CD55P08174 381 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 HCKP08631 526 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 SNRPAP09012 282 aaKnown RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 RBP1P09455 135 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 FBP1P09467 338 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 PCNAP12004 261 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 FAHP16930 419 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 MDH2P40926 338 aaKnown RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 HSPA7P48741 367 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 THBS3P49746 956 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 CLK3P49761 638 aaKnown RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 SELENOPP49908 381 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 P2RY4P51582 365 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 CCNG1P51959 295 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 KLF3P57682 345 aaPredicted RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 RPS23P62266 143 aaKnown RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 ROR2Q01974 943 aaKnown RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 IRF8Q02556 426 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 SLC3A1Q07837 685 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 LAPTM5Q13571 262 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 DDX39BQ13838 428 aaKnown RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 SLC29A2Q14542 456 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 TGFBIQ15582 683 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 TMEM95Q3KNT9 176 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 ARSJQ5FYB0 599 aaPredicted RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 CDKL4Q5MAI5 379 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 MROH9Q5TGP6 573 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 TTC19Q6DKK2 380 aaPredicted RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 C3orf33Q6P1S2 294 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 CCDC121Q6ZUS5 278 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 CYS1Q717R9 158 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 LCA5Q86VQ0 697 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 NUDT13Q86X67 352 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 EGFL6Q8IUX8 553 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 PDZD9Q8IXQ8 264 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 L3MBTL4Q8NA19 623 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 CCDC63Q8NA47 563 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 C8orf46Q8TAG6 207 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 C17orf50Q8WW18 174 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 IPCEF1Q8WWN9 437 aaPredicted RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 PIK3R3Q92569 461 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 LHX4Q969G2 390 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 ATP6V1E2Q96A05 226 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 TM4SF18Q96CE8 201 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 KLHL29Q96CT2 875 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 THOC1Q96FV9 657 aaKnown RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 WDFY2Q96P53 400 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 FRG2BQ96QU4 278 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 DCLRE1CQ96SD1 692 aaKnown RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 P2RX4Q99571 388 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 MCRIP2Q9BUT9 160 aaKnown RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 MRPL46Q9H2W6 279 aaKnown RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 ELOVL6Q9H5J4 265 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 CAB39LQ9H9S4 337 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 ZDHHC18Q9NUE0 388 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 DECR2Q9NUI1 292 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 TMEM106BQ9NUM4 274 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 PARPBPQ9NWS1 579 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 TAS2R9Q9NYW1 312 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 ZNF180Q9UJW8 692 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 NFU1Q9UMS0 254 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 ACOT9Q9Y305 439 aa2.69□□□□□ -1.98
TCOF1-208ENST00000506063 TNPO3Q9Y5L0 923 aaKnown RBP2.69□□□□□ -1.98
TCOF1-208ENST00000506063 A0A087WV62 115 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 BTBD17A6NE02 478 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 ZNF587BE7ETH6 402 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 STX16-NPEPL1H3BU86 382 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 RPL36A-HNRNPH2H7BZ11 118 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 UPK1AO00322 258 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 STX16O14662 325 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 TP73O15350 636 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 RIPK2O43353 540 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 SPRY3O43610 288 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 SYNGR1O43759 233 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 ENSAO43768 121 aaKnown RBP2.68□□□□□ -1.98
TCOF1-208ENST00000506063 SLC43A1O75387 559 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 PIAS1O75925 651 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 SEMA3DO95025 777 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 MFN2O95140 757 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 KLHL2O95198 593 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 WISP3O95389 354 aaPredicted RBP2.68□□□□□ -1.98
TCOF1-208ENST00000506063 OTCP00480 354 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 IGHV3-13P01766 116 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 HLA-HP01893 362 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 C2P06681 752 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 KLK1P06870 262 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 OR12D1P0DN82 309 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 MYL2P10916 166 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 IMPDH2P12268 514 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 CPT2P23786 658 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 PTX3P26022 381 aaPredicted RBP2.68□□□□□ -1.98
TCOF1-208ENST00000506063 CNTFRP26992 372 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 HMOX2P30519 316 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 RYKP34925 604 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 ECI1P42126 302 aa2.68□□□□□ -1.98
TCOF1-208ENST00000506063 PTDSS1P48651 473 aaKnown RBP2.68□□□□□ -1.98
TCOF1-208ENST00000506063 MTNR1BP49286 362 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms