RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 IGLV3-22A0A075B6J6 115 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 IGHV3-66A0A0C4DH42 116 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 TCRBV9S1A1TA0A576 114 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 F5H6K3 240 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 BCAS1O75363 584 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 ATP5LO75964 103 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 DIRAS3O95661 229 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 AP2A1O95782 977 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 ZDHHC11BP0C7U3 371 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 LINC00869P0C866 280 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 PNMTP11086 282 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 NCF1P14598 390 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 PSMC3P17980 439 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 MAPK3P27361 379 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 SOX6P35712 828 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 QARSP47897 775 aaKnown RBP1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 SLC7A9P82251 487 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 TNFRSF17Q02223 184 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 KLRC3Q07444 240 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 PLD1Q13393 1074 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 DUSP7Q16829 419 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 TTLL9Q3SXZ7 439 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 COA6Q5JTJ3 125 aaKnown RBP1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 BEND3Q5T5X7 828 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 TRIM69Q86WT6 500 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 ZNF573Q86YE8 665 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 RIMKLAQ8IXN7 391 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 UBALD2Q8IYN6 164 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 OSR2Q8N2R0 312 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 LINC00304Q8N9R0 145 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 IPMKQ8NFU5 416 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 OR52H1Q8NGJ2 320 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 CTNNBL1Q8WYA6 563 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 UFD1Q92890 307 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 ECSITQ9BQ95 431 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 UGT1A7Q9HAW7 530 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 UGT1A10Q9HAW8 530 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 UGT1A8Q9HAW9 530 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 TM9SF3Q9HD45 589 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 RFNGQ9Y644 331 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 TUBGCP6Q96RT7 1819 aa1.56□□□□□ -2.16
HMGB1P29-201ENST00000505659 MAPK13O15264 365 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 DIRAS1O95057 198 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 TCN2P20062 427 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 LAP3P28838 519 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 DMRTC1Q5HYR2 192 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 ZNF684Q5T5D7 378 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 CNIH2Q6PI25 160 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 CCDC80Q76M96 950 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 CALHM3Q86XJ0 350 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 FAM9BQ8IZU0 186 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 STPG2Q8N412 459 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 ARL10Q8N8L6 244 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 VN1R2Q8NFZ6 395 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 GABARAPL3Q9BY60 117 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 RPP21Q9H633 154 aaKnown RBP1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 RANBP3Q9H6Z4 567 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 C12orf10Q9HB07 376 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 GIN1Q9NXP7 522 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 ACTR3BQ9P1U1 418 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 CD84Q9UIB8 345 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 HOOK1Q9UJC3 728 aaKnown RBP1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 OR10H1Q9Y4A9 318 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 TIMM10BQ9Y5J6 103 aa1.55□□□□□ -2.16
HMGB1P29-201ENST00000505659 IGKV1D-13A0A0B4J2D9 117 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 A8MXQ7 604 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 H0YHG0 523 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 H3BNH8 94 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 XKRYO14609 159 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 HSD17B6O14756 317 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 CLDN3O15551 220 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 RBFOX2O43251 390 aaKnown RBP eCLIP1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 VAMP5O95183 116 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 IGKV1-13P0DP09 117 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 GYG1P46976 350 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 RAP1AP62834 184 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 SELPLGQ14242 412 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 C1orf220Q5T0J3 134 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 CNSTQ6PJW8 725 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 PIANPQ8IYJ0 282 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 TMEM123Q8N131 208 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 GPA33Q99795 319 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 OMDQ99983 421 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 TUBGCP2Q9BSJ2 902 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 RAB34Q9BZG1 259 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 GBA3Q9H227 469 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 RWDD1Q9H446 243 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 LY9Q9HBG7 655 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 LAMP5Q9UJQ1 280 aa1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 FBN1P35555 2871 aaKnown RBP1.54□□□□□ -2.16
HMGB1P29-201ENST00000505659 A8MUI8 341 aa1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 RRP8O43159 456 aaKnown RBP1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 ATP8B3O60423 1300 aa1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 IGKV1D-16P01601 117 aa1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 DRD5P21918 477 aa1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 ESRRGP62508 458 aa1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 AQP6Q13520 282 aa1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 NTM-AS1Q6ZSK4 140 aa1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 WDR86Q86TI4 376 aa1.53□□□□□ -2.16
HMGB1P29-201ENST00000505659 FNDC5Q8NAU1 212 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms